Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1716 ATGGAATCTGGGGATGAAACTAGCAGTAGTGATAATGTGGAACGTTCTGAGCTGGGTCGGTGCTTGAGAGCTGAAACTGTCAATAACAGAGTGGCAATTGCTGATGGGGATGGTATTACCCAAGGTAAAGAGGTTTGTCACTTGAAGAACAAAGATGTAAATAATAGTGTGGCAATGGCAGATGGGTTTGGTATTATTGAAGGGCAATCTGGTCGAGGCAAATATTTTCGAACTTATAAGAGGCGGAGGCATGCTAAGATGAGTTGTCCACTAAACAAAGTTCAGGATGACAGCAGAAAATGTGTGGAACCTACAAGTCTCCTATCAGATCAGGCTGTGAAGAATCCATGTGATTTAGCTGTAGGAAAAACTTCAAAAGATTATTTAAATGGACATTGGAGAAATGTTGCACTACAATGTTTATATCGTTCATTTGACAATGATAACAGTGGGATAGGGTGCTGCATAAGGGAAGCAATCATGAAAAATTCTAAAACCACTACAGACACGATTAAATGGTTCTCTCATAAGTTACAGAGCAATTCCAATAAGCATGCAGATATAATGCATGATGGATGTTCTAGTGAATCAGATGGCCATGATGTGACTAAGAAGTGTCAGCGTGTGATCTGTAATATCTTAGCCTCTGAGGAATTCAGTTCATTATGCATGGTGCTGTTTGAAAATTTTCAAGGAATGAAGCCTGAAAGTGTATTTGACCTTAGTGTCATAAACTCAAGGATGAAAGAGCAAGAATATGAACTATCACCTACACTTTTCTTGTCAGATATTGAACAGGTTTGGAGAAAGCTTCAAGATGTTGGAAATGAGATTTTTGCTATTGCCAAGAGCCTCTCTAGCATGTCAAGTGCTTCCTATTGTGAGCATGTGGGAGTTTCAGCACACAAATCATTTGAAGATGAAAAACAAGTGATCTGTAACCAGGCATTGGACTCTGACACAAAACCACAGCCGACAGAAGAATGTCTTACAACTAAATTTTGCACTTGCAGGCATTGTGGAGGTAAGGCAGATGGGACAGATTACTTGATTTGTGATTCACATGAGGTGATGTACCATCTGTCCTGTATAGGTATTGAGCCTGCCTTGAAAGAAATACGTGATAAAAGCTGGTTTTGTGCCACTTGTGTAGGATCTTCGCATGACAATTGTGTGGTGTGTGAAAGGTTGAATGTCCCAAAGTCCTTGAACAACACTGGTGGTGAGGAAAGCACACCTACAGATGATGAAACACCAAATGAGTTGCAAGAGAATTCAAATGGTACCTTCGATGGGATTCGGGTGTCCATAGCTGGGAGAAACTCACCTAATTGCAAAATTTGTGGTGAGGGGATCGGTGGTGAAAAATTTAAAGAATGTGACAACATTGATTGCCCCTATAAGTACTACCATGTAAGGTGTTTGTCAAGTAAAGAGCTCAAGACACCTATTCATTACAGTCATTATTGGTACTGTCCTTCTTGTTTATGCAGAGGTTGCCTCAAGAATAAAGAGGATTATAAGATTGTTCTCTGTGATGGGTGTGATCATGCATACCACTTCTATTGCATGGAACCGCCACGAAAATCTATGCCAAGAGGCAAAACATGGTTCTGCAGAAAATGTGATGCAGGGATCAAAGCAATCCGCCTGGCGAAAAAGATATATGCAAATGACAAGCGGAGAGCTCGTGACAATTTTTCGAGATCGAATGGTGCGCTCGGTAAGAAACGGCAACAGGTAGAAGAGTTAGACAGAGCTGGAGGAATGGATATGCTTTTAACTGCAGCCAATACTCTTAACTTTGAAGAGAACTTGGCTTCAGGCCAAATTGAGTCGCAAAGAATATGA 1851 0.4079 MESGDETSSSDNVERSELGRCLRAETVNNRVAIADGDGITQGKEVCHLKNKDVNNSVAMADGFGIIEGQSGRGKYFRTYKRRRHAKMSCPLNKVQDDSRKCVEPTSLLSDQAVKNPCDLAVGKTSKDYLNGHWRNVALQCLYRSFDNDNSGIGCCIREAIMKNSKTTTDTIKWFSHKLQSNSNKHADIMHDGCSSESDGHDVTKKCQRVICNILASEEFSSLCMVLFENFQGMKPESVFDLSVINSRMKEQEYELSPTLFLSDIEQVWRKLQDVGNEIFAIAKSLSSMSSASYCEHVGVSAHKSFEDEKQVICNQALDSDTKPQPTEECLTTKFCTCRHCGGKADGTDYLICDSHEVMYHLSCIGIEPALKEIRDKSWFCATCVGSSHDNCVVCERLNVPKSLNNTGGEESTPTDDETPNELQENSNGTFDGIRVSIAGRNSPNCKICGEGIGGEKFKECDNIDCPYKYYHVRCLSSKELKTPIHYSHYWYCPSCLCRGCLKNKEDYKIVLCDGCDHAYHFYCMEPPRKSMPRGKTWFCRKCDAGIKAIRLAKKIYANDKRRARDNFSRSNGALGKKRQQVEELDRAGGMDMLLTAANTLNFEENLASGQIESQRI* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1716 616 Pfam PHD-finger 497 543 IPR019787 -
Aev07g1716 616 Pfam PHD-finger 337 384 IPR019787 -
Aev07g1716 616 ProSiteProfiles Zinc finger PHD-type profile. 494 545 IPR019787 -
Aev07g1716 616 MobiDBLite consensus disorder prediction 404 427 - -
Aev07g1716 616 SUPERFAMILY FYVE/PHD zinc finger 440 496 IPR011011 -
Aev07g1716 616 ProSitePatterns Zinc finger PHD-type signature. 492 542 IPR019786 -
Aev07g1716 616 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 423 495 IPR013083 -
Aev07g1716 616 PANTHER D4, ISOFORM A 136 604 - -
Aev07g1716 616 SUPERFAMILY FYVE/PHD zinc finger 330 386 IPR011011 -
Aev07g1716 616 PANTHER HISTONE ACETYLTRANSFERASE 136 604 - -
Aev07g1716 616 ProSiteProfiles Zinc finger PHD-type profile. 442 498 IPR019787 -
Aev07g1716 616 SMART PHD_3 336 384 IPR001965 -
Aev07g1716 616 SMART PHD_3 497 543 IPR001965 -
Aev07g1716 616 SMART PHD_3 444 496 IPR001965 -
Aev07g1716 616 Gene3D - 496 545 - -
Aev07g1716 616 Gene3D - 214 389 - -
Aev07g1716 616 SUPERFAMILY FYVE/PHD zinc finger 497 548 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1716 Aev-Chr7 18041078 18046470 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1716 496 581 C2H2 Transcription Factor Family AT3G01460 31.395 6.86e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev07g1716 PHD 2.4e-11 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1716 - - lang:109337790 689.493