Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1705 ATGGGAAGGGGTAAGATCGAGATCAAGAGGATTGAGAACTCAAGCAACAGGCAAGTCACATACTCTAAGAGAAAGAATGGGATCCTAAAGAAGGCTAAGGAAATCACTGTTCTTTGTGATGCCCAAGTTTCCCTTATCATCTTTGCTGCTTCTGGAAAGATGCATGACTACATCAGCCCTTCTACTACGTTGGTAGACATCCTGGAGAGATACCACAAAACCTCAGGGAAGAGGCTCTGGGACGCAAAACATGAGAACCTAAACAGTGAAATTGAAAGAGTCAAGAAAGAGAATGACAGCATGCAAGTTGAACTCAGGCACTTGAAAGGAGACGATATCAACTCACTGAACTACAAGGAGCTGATGGGCTTAGAGGAAGCCTTAGAAAATGATGGAAGTGTACAGGATGTTCAGGAGAAACGACAAGATCTTGGAGGAGGAAAACAAGGAACTTAA 456 0.4342 MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEITVLCDAQVSLIIFAASGKMHDYISPSTTLVDILERYHKTSGKRLWDAKHENLNSEIERVKKENDSMQVELRHLKGDDINSLNYKELMGLEEALENDGSVQDVQEKRQDLGGGKQGT* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1705 151 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Aev07g1705 151 PANTHER MADS-BOX TRANSCRIPTION FACTOR 1 142 - -
Aev07g1705 151 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aev07g1705 151 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Aev07g1705 151 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Aev07g1705 151 MobiDBLite consensus disorder prediction 129 151 - -
Aev07g1705 151 SUPERFAMILY SRF-like 2 95 IPR036879 GO:0003677|GO:0046983
Aev07g1705 151 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Aev07g1705 151 CDD MADS_MEF2_like 2 80 IPR033896 GO:0000977|GO:0045944
Aev07g1705 151 Gene3D - 13 104 IPR036879 GO:0003677|GO:0046983
Aev07g1705 151 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Aev07g1705 151 ProSiteProfiles K-box domain profile. 84 151 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev07g1705 151 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Aev07g1705 151 Coils Coil 77 111 - -
Aev07g1705 151 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 142 - -
Aev07g1705 151 Pfam K-box region 82 142 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1705 Aev-Chr7 17940983 17947149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1705 1 130 MADS-box Gene Family AT5G20240 70.000 5.51e-65 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Aev07g1705 K-box 6.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1705 K09264 - gmx:100817554 252.677