Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev07g1696 | ATGAAACAGCAGCCATTGGTTGATTTCAATTTTGGAATAAGTGGTGAGAGATCATCCATAAGAAAGGGTTTTGGTTACTTGACATGGAAGTTTGGTTCATCCCCTGATATATCTCTCAAATTATACCTCTATCCATCTTCTCAAAAACCACAATCACATTGTTCTTTTCACAAAACCATCGATTGTGTCCATAAGCTTTCAATGGAACAAGAAGAGGGAAAACAATCTCCCAAAAGAACTCCATATAGTCAACTCGAGCAAGTTAGCTCAGATTTTATTCAAGCAATTGGCTTGCAAGAGCAAGACGAAACATTCATTACAACGACACTTGAAAGTGAAACTGAATCCTCGGATGATCACGATTTTGACAACGACGACGGCGATGGCGATGAAGGTGATTTTTTCCTGAGCCAGGAGTTTGAATCGGATCTTCAATTTCTTGAGAGTGAAGGAAGCAGCAGCTATGATGAAGAAATGGAAGAGTTCTATATCGATGTAGATGAATTGACTTATGAAGAATTGATTGAGTTGGGAGAATTTATAGGCAAAGAGAAGAGAGGATTATCAGAAAATGAAATTTGTTCATGCTTGAAATTCTACAAATTCGTTTCTGTTGAAAGCAATGGTGGGATCGACCGATGTGTAATTTGTCAGAATGAATATGAAGAAGGTCAAAGTGATGGCCTGGTGGCACTTCATTGTGGGCACCCTTATCACACAGATTGCATAACCAAGTGGCTTCAAATAAAACGGGTTTGCCCAATTTGTAGCACTGAAATTTTAGTTCCCAAGATGGGTTAA | 801 | 0.387 | MKQQPLVDFNFGISGERSSIRKGFGYLTWKFGSSPDISLKLYLYPSSQKPQSHCSFHKTIDCVHKLSMEQEEGKQSPKRTPYSQLEQVSSDFIQAIGLQEQDETFITTTLESETESSDDHDFDNDDGDGDEGDFFLSQEFESDLQFLESEGSSSYDEEMEEFYIDVDELTYEELIELGEFIGKEKRGLSENEICSCLKFYKFVSVESNGGIDRCVICQNEYEEGQSDGLVALHCGHPYHTDCITKWLQIKRVCPICSTEILVPKMG* | 267 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev07g1696 | 266 | ProSiteProfiles | Zinc finger RING-type profile. | 214 | 257 | IPR001841 | - | |
Aev07g1696 | 266 | SUPERFAMILY | RING/U-box | 213 | 263 | - | - | |
Aev07g1696 | 266 | MobiDBLite | consensus disorder prediction | 109 | 134 | - | - | |
Aev07g1696 | 266 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 68 | 260 | IPR045191 | GO:0061630 | |
Aev07g1696 | 266 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 189 | 262 | IPR013083 | - | |
Aev07g1696 | 266 | SMART | ring_2 | 214 | 256 | IPR001841 | - | |
Aev07g1696 | 266 | PANTHER | E3 UBIQUITIN LIGASE BIG BROTHER-RELATED-LIKE | 68 | 260 | - | - | |
Aev07g1696 | 266 | MobiDBLite | consensus disorder prediction | 116 | 134 | - | - | |
Aev07g1696 | 266 | Pfam | Ring finger domain | 213 | 256 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev07g1696 | Aev-Chr7 | 17814929 | 17815827 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev07g1696 | 150 | 261 | C3H Transcription Factor Family | AT2G15530 | 45.299 | 2.15e-25 | 103 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev07g1696 | K19045 | - | gmx:100780686 | 230.335 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev08g0941 | 08 | 5575113 | 5575730 | Aev07g1696 | 07 | 17814929 | 17815827 | PCT |