Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1444 ATGTCTCAGACTAACTGGGAAGCTGATAAGATGTTAGATGTTTACATCCATGATTACCTAGTGAAGAGAGATTTGAAGGCTTCAGCTCAGGCTTTTCAAGCTGAAGGGAAAGTATCCTCTGACCCTGTTGCTATTGATGCCCCCGGAGGATTTCTATTTGAGTGGTGGTCAGTTTTCTGGGACATATTTATAGCCAGGACTAATGAGAAGCACTCAGAGGTTGCTGCATCTTATATTGAGACGCAGTTAATGAAGGCTAGGGAGCAGCAGCAGCAGCAACAACAGCTGCAGCCGCAACCCCAGCAGTCACAACATCAGCAGCAACAAAACATGCAGATGCAACAGCTCCTGTTACAGAGGCATGCTCAGCAGCAGCAACAGCAGCAACAGCAACAGCAGCAACAACAACAGCAACAGCAACCACCGCAACAGCCACAGAGTAGGGATAGGGCTCATCTCTTAAATGGTGGTACAAATGGGTTGGTTGGAAACCCTGGCACTGCTAATGCACTAGCAACTAAGATGATTGAGGACAGGTTGAAACTGCCACTTCAGAGGGATTCTTTGGATGATGGAGCAATGAAGCAAAGATTTGGAGATCAGCTCATGGACCCAAATCATGCCTCAATATTGAAGTCATCTGCAGCTACTGGCCAGCCATCAGGGCAAGTTTTGCATGGTGCTGCTGGTGGGATGTCACCACAGGTTCAAGCTCGCAGTCAGCAATTACCTGGGTCTACTCCGGATATAAAGAGTGAGATTAGTCCTGTTTTAAATCCAAGAGCAGCATGCCCTGAAGGATCTTTGATAGGAATGCCTGGAAATCAAGGAAGCAACAACCTGACTCTGAAAGGGTGGCCACTCACAGGGCTGGATCAACTACGTTCTGGTCTTCTTCAGCAACAAAAACCTTTCATGCAAGGACCTCAGCCTTTTCATCAACTTCCAATGTTGACACCACAGCATCAGCAACAGCTAATGTTAGCACAAGCACAGCAAAATTTGGCATCACCGTCTGCCAGTGATGATACTAGAAGACTCAGAATGCTAATGAATAATAGGAGCATGAGCCTAAGTAAGGATGGTCTTCCAAATCCTGTTGGGGATGTAGTATCAAATGCTGGATCACCTCTTCCAGGGGGTGGCCCTCCGTTTCCTCGTGGAGATACAGATATGCTAATGAAGTTGAGACTGGCTCAGTTACACCAGCATCAGCAGCAGCAGAATGCCAATCCACAGCAGCAGCAACAACTCCAACAGCATGCTCTTTCAAATCAACAATCTCTGTCTTCCAATCCTAACCTGCATCAACCAGATAAAGTCGGGGGAGGTGGCAGTGTCACTGCAGATGGCAGCATGTCAAACTCCTTTAGAGGAAATGATCAGGTTTCCAAAAACCAGACCGGGAGAAAGAGAAAACAGCCTGTATCTTCATCTGGACCTGCCAATAGCTCAGGAACAACAAATACAGCAGGCCCGTCTCCAAGTTCAGCGCCCTCAACTCCTTCAACTCATACACCTGGTGATGTGATGTCAATGCCTGCTTTACCTCATAGTAGTAGTTCTACAAAGCCTCTAATGATGTTTGGCACTGATGGCACTGGAACTCTTACATCATCTTCAAACCAGCTGGCTGATGTGGATCGTTTTGTGGAGGATGGATCGCTTGATGACAATGTTGAGTCTTTTTTATCCCATGATGATACAGACCCTAGAGATACTGTTGGTCGTTGTATGGATGTAAGCAAAGGCTTCACATTTTCTGAAGTAAATGCTGTGCGTTCAAGCACAAGCAAAGTCGTCTGTTGCCATTTCTCATCTGATGGGAAATTGCTTGCAAGTGGTGGACATGACAAAAAGGCTGTTTTATGGTACACAGATTCTCTCAAGCAGAAAGCAATTCTTGAAGAGCATTCATCTTTAATAACTGATGTCCGATTTAGCCCAAGCATGCCTCGTCTCGCTACATCTTCATTTGACAAAACTGTCAGGGTTTGGGATGTTGACAATCCTGGGTATTCTCTACGCACTTTTACTGGTCATTCAACATCTGTTATGTCCCTAGATTTTCACCCTAATAAAGATGACCTTATCTGCTCTTGTGATGGTGATGGCGAGATACGATATTGGAGCATCAACAATGGCAGTTGTGCTAGAGTCTCAAAGGGTGGCACTGTCCAGATGAGGTTTCAACCTAGACTGGGGAGGTATCTTGCTGCAGCCGCAGAGAATGTTGTGTCTATACTTGATGTGGAGACACAAGCATGCCGCTATTCTTTAAAGGGACATACAAAGCCAATACATTCTGTGTGTTGGGATCCTTCAGGGGAGTTCCTAGCATCTGTCAGTGAGGACTCTGTAAGGGTTTGGACTCTTGGAACAGGGAGCGAAGGGGAATGTGTTCATGAGCTTAGCTGTAATGGTAACAAGTTTCACTCTTGTGTTTTCCATCCAACCTATTCTTCATTGTTGGTCATTGGCTGTTACCAGTCATTGGAGTTGTGGAACATGAGCGAGAACAAGACAATGACTCTGGGTGCACATGAAGGACTGGTTGCTGCTTTGGCAGTTTCAACTGTAAATGGTTTGGTTGCTTCAGCCAGTCACGACAAGTTCGTCAAGCTCTGGAAATGA 2634 0.4594 MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQLMKAREQQQQQQQLQPQPQQSQHQQQQNMQMQQLLLQRHAQQQQQQQQQQQQQQQQQQPPQQPQSRDRAHLLNGGTNGLVGNPGTANALATKMIEDRLKLPLQRDSLDDGAMKQRFGDQLMDPNHASILKSSAATGQPSGQVLHGAAGGMSPQVQARSQQLPGSTPDIKSEISPVLNPRAACPEGSLIGMPGNQGSNNLTLKGWPLTGLDQLRSGLLQQQKPFMQGPQPFHQLPMLTPQHQQQLMLAQAQQNLASPSASDDTRRLRMLMNNRSMSLSKDGLPNPVGDVVSNAGSPLPGGGPPFPRGDTDMLMKLRLAQLHQHQQQQNANPQQQQQLQQHALSNQQSLSSNPNLHQPDKVGGGGSVTADGSMSNSFRGNDQVSKNQTGRKRKQPVSSSGPANSSGTTNTAGPSPSSAPSTPSTHTPGDVMSMPALPHSSSSTKPLMMFGTDGTGTLTSSSNQLADVDRFVEDGSLDDNVESFLSHDDTDPRDTVGRCMDVSKGFTFSEVNAVRSSTSKVVCCHFSSDGKLLASGGHDKKAVLWYTDSLKQKAILEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDVDNPGYSLRTFTGHSTSVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCARVSKGGTVQMRFQPRLGRYLAAAAENVVSILDVETQACRYSLKGHTKPIHSVCWDPSGEFLASVSEDSVRVWTLGTGSEGECVHELSCNGNKFHSCVFHPTYSSLLVIGCYQSLELWNMSENKTMTLGAHEGLVAALAVSTVNGLVASASHDKFVKLWK* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1444 877 Coils Coil 113 140 - -
Aev07g1444 877 MobiDBLite consensus disorder prediction 400 437 - -
Aev07g1444 877 MobiDBLite consensus disorder prediction 356 524 - -
Aev07g1444 877 MobiDBLite consensus disorder prediction 234 253 - -
Aev07g1444 877 MobiDBLite consensus disorder prediction 216 253 - -
Aev07g1444 877 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 635 670 - -
Aev07g1444 877 ProSiteProfiles Trp-Asp (WD) repeats profile. 760 800 IPR001680 GO:0005515
Aev07g1444 877 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 845 877 - -
Aev07g1444 877 ProSiteProfiles Trp-Asp (WD) repeats profile. 678 720 IPR001680 GO:0005515
Aev07g1444 877 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 678 716 - -
Aev07g1444 877 SMART WD40_4 671 711 IPR001680 GO:0005515
Aev07g1444 877 SMART WD40_4 586 625 IPR001680 GO:0005515
Aev07g1444 877 SMART WD40_4 628 667 IPR001680 GO:0005515
Aev07g1444 877 SMART WD40_4 797 836 IPR001680 GO:0005515
Aev07g1444 877 SMART WD40_4 753 791 IPR001680 GO:0005515
Aev07g1444 877 SMART WD40_4 838 877 IPR001680 GO:0005515
Aev07g1444 877 SUPERFAMILY WD40 repeat-like 589 877 IPR036322 GO:0005515
Aev07g1444 877 Gene3D - 569 726 IPR015943 GO:0005515
Aev07g1444 877 CDD WD40 589 877 - -
Aev07g1444 877 SMART Lish 8 40 IPR006594 GO:0005515
Aev07g1444 877 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 1 877 IPR044716 GO:0003714
Aev07g1444 877 Pfam WD domain, G-beta repeat 674 711 IPR001680 GO:0005515
Aev07g1444 877 Pfam WD domain, G-beta repeat 633 667 IPR001680 GO:0005515
Aev07g1444 877 Pfam WD domain, G-beta repeat 756 790 IPR001680 GO:0005515
Aev07g1444 877 Pfam WD domain, G-beta repeat 840 877 IPR001680 GO:0005515
Aev07g1444 877 Pfam WD domain, G-beta repeat 598 624 IPR001680 GO:0005515
Aev07g1444 877 ProSiteProfiles Trp-Asp (WD) repeats profile. 593 624 IPR001680 GO:0005515
Aev07g1444 877 Pfam LisH 10 36 IPR006594 GO:0005515
Aev07g1444 877 ProSiteProfiles Trp-Asp (WD) repeats profile. 845 877 IPR001680 GO:0005515
Aev07g1444 877 PANTHER TRANSCRIPTIONAL COREPRESSOR LEUNIG-LIKE PROTEIN 1 877 - -
Aev07g1444 877 MobiDBLite consensus disorder prediction 89 153 - -
Aev07g1444 877 ProSitePatterns Trp-Asp (WD) repeats signature. 654 668 IPR019775 -
Aev07g1444 877 ProSiteProfiles LIS1 homology (LisH) motif profile. 8 40 IPR006594 GO:0005515
Aev07g1444 877 Gene3D - 727 877 IPR015943 GO:0005515
Aev07g1444 877 MobiDBLite consensus disorder prediction 448 508 - -
Aev07g1444 877 MobiDBLite consensus disorder prediction 89 166 - -
Aev07g1444 877 ProSiteProfiles Trp-Asp (WD) repeats profile. 635 670 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1444 Aev-Chr7 13690385 13708186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1444 672 876 Miscellaneous Gene Families AT5G08390 24.762 1.74e-12 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Aev07g1444 WD40 0.17 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1444 - - aip:107605121 1397.88