Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1380 ATGTCAAACTGTCACCGCAACAACCTTGGCTCTCTCGTTCTCGGCCACCACCACCACCCTTCTTCCAAGTCCTCCGCCGTCGACGGCTACAACTTCCGCCTATGGAACTCCCTCTCCGCCTCCTCCTTCCGCCGGATCCTACTCGATGCCCTTAGCTGCGGCGGCGCCACATTCCGCCACCACCACACCGACACCTCCACCACCGCTTCCGATGACTCGAACCCGAACCCGAAGCGCAATGCGAGGTCGGAGAAGCTCTCCGATCTCCTGAGCATTGAGGAATCGGATGCCGACGCGGAGACGAAGAAGAAGGAGGAGGCTCTTGAGGACCTCAAGCGAATCGTGGCGGAGCTTCGTGCAGCTGCAGCGGCGGAGGATTCGCCGGCGCGGCGAGCTTCCGCTGCCGCTGCCTCCGCCGTGAGGAGGCTCGCGAAGGAGGACTCAGAGGTTAGAGTGACGCTCGCGATGCTTGGAGCGATCCCTCCTCTCGTCGCCATGCTCGATTCTGAAGACCTCGATTCTCAGGTCGCTTCGCTCTACGCTGTGCTCAACCTCGGAATCGGAAATGATGCAAATAAAGCAGCCATTGTGAAAGTTGGAGCTATTCACAAAATGCTGAAGCTCATTGAATCTCCAGATTCTATGGATTCATCAGTTTCTGAAGCAATCGTTGCAAATTTTCTTGGACTAAGTGCTTTGGATTCAAACAAACCAATAATTGGGTCCTCTGCTGCAGTAGGATTCCTAGTTAGAACCCTTCAGAATTCAGATAACAAAACAAGCCTCCAATCCAAGCAAGATGCTCTGAGAGCACTGTACAATCTTTCAATCTTCCCAGCAAATGTTTCATTCATTCTAGAAACCAACATGGTCCCATTTCTGGTAAATTCCATAGGAGACATGGAAGTGACTGAAAGATCACTAGCAATTCTAAGCAACTTGGTGTCGATTCGCGAGGGTAGGAAAGCCATAAGTGCTGTTCCTGATGCTTTCCCTATCCTTGTGGATGTGTTGAATTGGACAGATTCACCAGAATGTCAGGAAAAGGCATCCTATGTTTTGATGGTAATGGCGCACAAGTCCTATGGTGATAGGCAGGCCATGATTGAGGCAGGGATTGCAACATCGCTGCTCGAGTTGTCGCTTCTTGGAACCACATTGGCTCAGAAGAGGGCTTCAAGGATATTGGAGTTTTTGAGGTTGGACAAAGGGAAGCAGGTCTCAGGAAACTTCGGCGGAGGAAACCTTGGCTCAACCGTGTCGGCTCCTATTTGCGGCTCCTCTTCATCTTGTGCGAAGACAGATGGAGGAGGAAAAGAGGGCTCTGAGGAGGAGGAGGATATGATGAGTGAAGAGAAGAGAGCAGTGAAGCAGTTAGTTCAGCAGAGTTTGCAGAACAACATGAGGAAGATTGTGAAGAGAGCTAATTTGCCTCAAGATATTGTTCCCTCAGATCATTTCAAGTCACTCACTACAAGCTCGACATCGAAGAGCCTTCCATTTTGA 1506 0.5093 MSNCHRNNLGSLVLGHHHHPSSKSSAVDGYNFRLWNSLSASSFRRILLDALSCGGATFRHHHTDTSTTASDDSNPNPKRNARSEKLSDLLSIEESDADAETKKKEEALEDLKRIVAELRAAAAAEDSPARRASAAAASAVRRLAKEDSEVRVTLAMLGAIPPLVAMLDSEDLDSQVASLYAVLNLGIGNDANKAAIVKVGAIHKMLKLIESPDSMDSSVSEAIVANFLGLSALDSNKPIIGSSAAVGFLVRTLQNSDNKTSLQSKQDALRALYNLSIFPANVSFILETNMVPFLVNSIGDMEVTERSLAILSNLVSIREGRKAISAVPDAFPILVDVLNWTDSPECQEKASYVLMVMAHKSYGDRQAMIEAGIATSLLELSLLGTTLAQKRASRILEFLRLDKGKQVSGNFGGGNLGSTVSAPICGSSSSCAKTDGGGKEGSEEEEDMMSEEKRAVKQLVQQSLQNNMRKIVKRANLPQDIVPSDHFKSLTTSSTSKSLPF* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1380 501 Coils Coil 97 124 - -
Aev07g1380 501 Pfam Armadillo/beta-catenin-like repeat 147 185 IPR000225 GO:0005515
Aev07g1380 501 SUPERFAMILY ARM repeat 127 399 IPR016024 -
Aev07g1380 501 Gene3D - 117 259 IPR011989 -
Aev07g1380 501 SMART arm_5 147 187 IPR000225 GO:0005515
Aev07g1380 501 SMART arm_5 189 232 IPR000225 GO:0005515
Aev07g1380 501 SMART arm_5 320 359 IPR000225 GO:0005515
Aev07g1380 501 SMART arm_5 233 277 IPR000225 GO:0005515
Aev07g1380 501 SMART arm_5 278 316 IPR000225 GO:0005515
Aev07g1380 501 Coils Coil 442 462 - -
Aev07g1380 501 MobiDBLite consensus disorder prediction 482 501 - -
Aev07g1380 501 MobiDBLite consensus disorder prediction 61 76 - -
Aev07g1380 501 MobiDBLite consensus disorder prediction 428 453 - -
Aev07g1380 501 MobiDBLite consensus disorder prediction 485 501 - -
Aev07g1380 501 MobiDBLite consensus disorder prediction 77 104 - -
Aev07g1380 501 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 501 - -
Aev07g1380 501 Gene3D - 260 409 IPR011989 -
Aev07g1380 501 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 501 - -
Aev07g1380 501 MobiDBLite consensus disorder prediction 61 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1380 Aev-Chr7 12679883 12682146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1380 140 406 U-box Gene Family AT1G67530 31.752 2.26e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1380 - - mtr:MTR_1g014420 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1380 07 12679883 12682146 Aev08g0553 08 3138561 3140354 PCT