LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev07g1323	ATGGCTCCACAGAAGGAAAAACTTTCCCATGTTTCTGATGACACTTCAAGGAAAGAAACCTTCATGGATGAGAAGGATGAGATTCCTAAGATGGAAGCCACACAGGTGACAAGGAGTAATCAAAGCTCACCTATAATAGATGAAAGTGAGAAGGTGAATCAAATAAGTGTCTTGATGCAGAGGATTGCTGAAGCCAAGTACCAATTGGAGAAGAAGCGCAAAGAAAATCGAGAGGAAGAGTTGACTCTATGCATGTACGAGTGCTTACGAAGCAAAAAGTTGCCAGACAACCTGACTATTACAGATCTGAAGGATATGGAGAAACTGATTGATCGACATATAAAGGAAATTGAAGATAGGATGGCTAACCTGGATGACTAG	381	0.4094	MAPQKEKLSHVSDDTSRKETFMDEKDEIPKMEATQVTRSNQSSPIIDESEKVNQISVLMQRIAEAKYQLEKKRKENREEELTLCMYECLRSKKLPDNLTITDLKDMEKLIDRHIKEIEDRMANLDD*	127

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev07g1323	126	MobiDBLite	consensus disorder prediction	1	32	-	-
	Aev07g1323	126	MobiDBLite	consensus disorder prediction	33	47	-	-
	Aev07g1323	126	Coils	Coil	55	82	-	-
	Aev07g1323	126	MobiDBLite	consensus disorder prediction	1	47	-	-
	Aev07g1323	126	Coils	Coil	103	123	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev07g1323	Aev-Chr7	11956655	11957132	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev07g1323	1	121	Type I MADS-box Gene Family	AT5G48670	29.412	1.65e-11	58.2

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev07g1323	-		-	mtr:MTR_1g033370	81.6481

Showing 1 to 1 of 1 entries