Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1284 ATGGAATCTGAGGATTTGGTGAGACAAGAATTGGAGGAACTGCAGAAACAATTGGGGAAGAAGCAAAAATTCGAGAGCGCTGTTTCGTCTCTCAAATCATTGCTTCAAAGCTCATATGCATCAGCTTCACCCTCTCTCCGCAAATCTTTCTATACAGTTATATGCCGGGTTGCTACTGTGTTGAAGACCAGATATACAGCACCTGGTTTCTGGAATGCTGGCTTGGGCCTTTTTGAGCAGGCTGAATTGCTTGTTTCTGAACCTTCTGAAAAAGAGTACTTGAATGCTTGCATTGCTCAGGCACGGGAACATTTGCATTTAGGAGACAACCCGTCACAAGCTTCGCAGCCTGCAGAGAATCATGCAAATGGAGGATATCTTTTTGAGGGGCACCTTACTGTAGATCCAGAGCCTCCACAGCCGCAATGGTTGGTGCAGTCAAACCTCTTGTCAACAGCTGCTACATTGTTTACTGCTGAATCCTCTCAAGGCTCAGCAACAAATGATACCACCGTGGAGGAGGCTGCAAGTGTGCTTCAAGAGCTGATAAATAGATTGGAAGAAGCCGTCCCCCTGATGGTGGATGATGGTTCTGTACCTCCAAGGGCCCCTCCTGCTAGTAAAGAAGTTGTGGCGAGACTTCCTGTCATTACTCTCACTGAGGAAATCCTGTCTAAAATGGGGAAAGATGCAGAGTGTGCAATTTGCAGGGAAAATTTGGCTCTAAATGACAAGATGCAAGAATTACCTTGCAAGCACACGTTCCACCCTCCATGTCTAAAGCCTTGGCTGGATGAGCACAATTCTTGTCCAATCTGTCGGTATGAGCTGAAAACTGATGATCATGCCTATGAGAGCTGGAAGGAACGTGAGAAGGAAGCTGAAGAAGAGAGGAAAGGTGCTGAAAATGCCGTTCGAGGTGGTGAATATATGTATGTCTAG 942 0.4628 MESEDLVRQELEELQKQLGKKQKFESAVSSLKSLLQSSYASASPSLRKSFYTVICRVATVLKTRYTAPGFWNAGLGLFEQAELLVSEPSEKEYLNACIAQAREHLHLGDNPSQASQPAENHANGGYLFEGHLTVDPEPPQPQWLVQSNLLSTAATLFTAESSQGSATNDTTVEEAASVLQELINRLEEAVPLMVDDGSVPPRAPPASKEVVARLPVITLTEEILSKMGKDAECAICRENLALNDKMQELPCKHTFHPPCLKPWLDEHNSCPICRYELKTDDHAYESWKEREKEAEEERKGAENAVRGGEYMYV* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1284 313 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 7 307 - -
Aev07g1284 313 SMART ring_2 233 273 IPR001841 -
Aev07g1284 313 MobiDBLite consensus disorder prediction 291 313 - -
Aev07g1284 313 ProSiteProfiles Zinc finger RING-type profile. 233 274 IPR001841 -
Aev07g1284 313 PANTHER ABI3-INTERACTING PROTEIN 2-1 7 307 - -
Aev07g1284 313 Pfam Ring finger domain 232 274 IPR001841 -
Aev07g1284 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 196 280 IPR013083 -
Aev07g1284 313 Coils Coil 284 304 - -
Aev07g1284 313 SUPERFAMILY RING/U-box 227 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1284 Aev-Chr7 11525390 11528463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1284 7 313 C3H Transcription Factor Family AT5G20910 66.558 1.10e-139 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1284 K16274 - gmx:100800189 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1284 07 11525390 11528463 Aev07g1284 07 11525390 11528463 ECH