Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1229 ATGTCTCGTGTATATGTTGGTAACCTTGATTCAAGAGTCACTGAGAGGGATCTTGAAGACGAGTTTCGTGTCTTCGGAGTTATACGGAGTGTTTGGGTTGCAAGGAGGCCACCTGGTTATGCTTTTATTGACTTTGATGACGGTAGAGATGCACGTGATGCTATTCGGGAATTGGATGGCAAAAATGGTTGGAGGGTTGAGCTTTCTCACAATTCTAGAGGTGGAGGCGGTGGTGGTCGTGGAGGTGGTCGTGGTCGCTCTGGTGGTTCTGATTTGAAATGCTATGAGTGCGGTGAACCTGGTCATTTTGCTCGTGAGTGTCGCATGCGTGGTGGTTCAGGAAGACGTCGTAGCCGCAGCCCACCTCGGTTCCGTAGGAGCCCAAGTTATGGTCGTAGAAGTTACAGTCCACGACGATCCCCTAGGCGCCGGAGCGTGTCACCCCGTGGAGGCAGCTACAGCAGGTCACCTCCTTACCGTGGTCGTGAGGAGCTTCCGTATGCTAATGGAAATGGCATTAAGGAACGACGCCGAAGCAGAAGTTGA 546 0.522 MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDGRDARDAIRELDGKNGWRVELSHNSRGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRMRGGSGRRRSRSPPRFRRSPSYGRRSYSPRRSPRRRSVSPRGGSYSRSPPYRGREELPYANGNGIKERRRSRS* 182
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1229 181 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 2 173 - -
Aev07g1229 181 MobiDBLite consensus disorder prediction 98 113 - -
Aev07g1229 181 SMART c2hcfinal6 93 109 IPR001878 GO:0003676|GO:0008270
Aev07g1229 181 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4 61 IPR000504 GO:0003723
Aev07g1229 181 SUPERFAMILY RNA-binding domain, RBD 3 88 IPR035979 GO:0003676
Aev07g1229 181 Gene3D - 1 73 IPR012677 -
Aev07g1229 181 ProSiteProfiles Zinc finger CCHC-type profile. 93 108 IPR001878 GO:0003676|GO:0008270
Aev07g1229 181 SMART rrm1_1 3 69 IPR000504 GO:0003723
Aev07g1229 181 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR RSZ22A-LIKE ISOFORM X1 2 173 - -
Aev07g1229 181 CDD RRM_SRSF3_like 3 71 - -
Aev07g1229 181 Pfam Zinc knuckle 93 108 IPR001878 GO:0003676|GO:0008270
Aev07g1229 181 SUPERFAMILY Retrovirus zinc finger-like domains 86 110 IPR036875 GO:0003676|GO:0008270
Aev07g1229 181 Gene3D - 88 149 - -
Aev07g1229 181 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 2 73 IPR000504 GO:0003723
Aev07g1229 181 MobiDBLite consensus disorder prediction 66 181 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aev07g1229 Aev-Chr7 10870753 10874202 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1229 2 60 Eukaryotic Initiation Factors Gene Family AT2G36660 39.683 3.17e-06 44.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1229 K12896 - tcc:18587644 241.121