Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1226 ATGAGAACCAAGACTGTCGGTGGACGTAGGAAGCGTCCACGCTTTACAACTCCTCCTTTTCTCACCACCTCCCAGGACGAATATAGTGCAATGAGAGACATTCCAACTGCTGATTGCATTGATCAGCATTCTAGCGGAAGCCCTCTCGTGGTTTTGAATCATGAGTCCGTTGATTGGTTGGACAAGAGTATTTGCATATGTTGCAACAAAGGTGAGGGAGTGTTAGTTTGTAGTGAAAAGGGTTGTCCTGTGGCTTTACACGCCAAGTGTATATGCTCGGAATCTAAATTTGATGATTCGGGTAACTTCTATTGCCCTTATTGCTGGTACAAGCGTGTGGTTGATAGGTGTCAAGAGATGAAGAGAAAGGTCACAATAGCAAAGAAAGCTTTGTCAAGCTTTTTGGATAAAGATGAGGTTACAAGTGACAAATTGGTGCAGAAGGACGAGTGTACTAAGAGAAAAGGGGCCGATGATGGAGATGGGATCTCATTAGGCAGTGAGAGTAGGCAGGGCACTGATGGTGTCGACATTCAGTCCTTTCAGCCCAAGGGAGAAGAACCACGAAAGATGCAAAATTCTGATGGTAATCAATGTGAGATAGCACTTGAAGATCAGGCTGGCAGAGTTTGTGATTTTAGACTTTGTAGAGAACAAGAGATTCTAGTAGGTATTAACAAGGTTCGGGATTCTATGAACGAGGAGAAATTTGATGAACCTAACAAAACTGAAACAGGTGAGATCAGATTTTTGGAAGGGAAAGAAAGCCTTGAAACAGAGGATTCAAGACATAATACGGAGGATGTGCGTGAAAGAATTGATGAGGTTGCAGAGGAAGACGAACCTTTGAGGACTATGCACTTGGGAAACTGTACTGACAGACAATCACCAGATATAGCATTAGCCAAAGGGACACAAGAAAGTGTTGCAAAATCTACAGAGATGCGCAGGATGAGAGGTGAAGGAAAGAAGCCCCATAGAGAACAAAAAGTGTCTGCAACAGGTAGCTCTGTAAGTGAAACTAATGACTCAGATTCTGAGGTTATCTCAGGGATAAAACGCCATGGCAAAAGGAAAGCTAAAAAAACATCATATCTTCAGAATGTTGCTACTGTAGGGAAATCATTGTTACAGGAGCATAAAACTAAAGGGGAAAATCCTAGTGACATAAATAAGGAAGTTACCAGCTCTAGAATTCAAAGACATAAACAGAGTTTGTCAAAGCCAGTCAACAATTGGAGTTTAATGATAAGGCGTAAGAAATTACCCTGGACTGCTGAAGAAGAAGAAGCTCTACAGGATGGAGTGTTAAGGTTCTCAAAGGAAAATCATAATATCCCTTGGAAGACAATTTTAGAATCTGGTCGTCATGTTTTTGATAAGACTCGTACACCTGTTGACCTCAAGGATAAATGGAGAAATATGATCTGTTAG 1434 0.4156 MRTKTVGGRRKRPRFTTPPFLTTSQDEYSAMRDIPTADCIDQHSSGSPLVVLNHESVDWLDKSICICCNKGEGVLVCSEKGCPVALHAKCICSESKFDDSGNFYCPYCWYKRVVDRCQEMKRKVTIAKKALSSFLDKDEVTSDKLVQKDECTKRKGADDGDGISLGSESRQGTDGVDIQSFQPKGEEPRKMQNSDGNQCEIALEDQAGRVCDFRLCREQEILVGINKVRDSMNEEKFDEPNKTETGEIRFLEGKESLETEDSRHNTEDVRERIDEVAEEDEPLRTMHLGNCTDRQSPDIALAKGTQESVAKSTEMRRMRGEGKKPHREQKVSATGSSVSETNDSDSEVISGIKRHGKRKAKKTSYLQNVATVGKSLLQEHKTKGENPSDINKEVTSSRIQRHKQSLSKPVNNWSLMIRRKKLPWTAEEEEALQDGVLRFSKENHNIPWKTILESGRHVFDKTRTPVDLKDKWRNMIC* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1226 477 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 154 IPR013083 -
Aev07g1226 477 MobiDBLite consensus disorder prediction 331 346 - -
Aev07g1226 477 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 51 476 - -
Aev07g1226 477 MobiDBLite consensus disorder prediction 301 363 - -
Aev07g1226 477 CDD SANT_TRF 423 476 - -
Aev07g1226 477 MobiDBLite consensus disorder prediction 379 406 - -
Aev07g1226 477 SUPERFAMILY Homeodomain-like 418 476 IPR009057 -
Aev07g1226 477 Pfam Myb-like DNA-binding domain 422 475 IPR001005 -
Aev07g1226 477 MobiDBLite consensus disorder prediction 153 195 - -
Aev07g1226 477 MobiDBLite consensus disorder prediction 310 330 - -
Aev07g1226 477 ProSiteProfiles Myb-like domain profile. 416 476 IPR001005 -
Aev07g1226 477 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 51 476 - -
Aev07g1226 477 SUPERFAMILY FYVE/PHD zinc finger 57 112 IPR011011 -
Aev07g1226 477 Gene3D - 415 476 - -
Aev07g1226 477 ProSitePatterns Zinc finger PHD-type signature. 65 108 IPR019786 -
Aev07g1226 477 MobiDBLite consensus disorder prediction 389 406 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1226 421 475 Single Myb Histone (SMH) Gene Family AT3G49850 48.214 1.34e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev07g1226 Myb_DNA-binding 2.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1226 - - aip:107605217 457.603