Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1217 ATGGAGAGACAGAGCAAAGAGATAAATACAATCTTCTCTGTTCCAGAGACTCCTCCAAGTCCATGTACACCATTGCAGAATCCAAATGAAAAGAAACAGCAACAATCTGTTGAGGAAGAAGAGGAAGAAAAGGAGAAAAAGTTGGATTCTTTATTGGATCTGAATGTCTCTGGTGATGATTTTGATTTTCTCAGATGCAGTTCTGAAGGGCTAGAACTGAATCTCATAACTTGTTTGGATGTTGATGATTCAACAACCAAGGCTAATAGTTTTTCAGGGAACACTCTCAGCTCTGATGGTTCAGAATCAGAACAACCAGAGCCGAGAGTGTTCTCCTGCAACTATTGCCAGAGGAAATTCTACAGCTCACAAGCACTTGGAGGGCACCAAAATGCTCACAAAAGAGAGAGATCAATTGCAAAAAGAGGTCACAGATTTGGAACACAAATAATTTCCTCTGCCTCAGCTTTTGGAATTCCTTTTATGCATAGTCACAGGTATGCCACTTGGAATTCCTTTTGTAATAATAATAATAATAATAAGGCACTTGGAATTCAAGCACATTCCATGATTCAGAAACCTTCTCAAGGTTCCTCTAATGGATTTGGAAGCTCTAGTTTTCATCATAATGGATGGTCAAGACCCCTTATTGGTCAACAACCTGGAATAGCAAAGTTAGCTATGGCAGATAATTTTCACAGAGCAGTATCATCAAGAGGAGGTAGTGTTGGTAGGTTTGAATTGGCTAATACTATGATGAATTCTGCAGCAAATAAAGAAATTAGTGGATATTTGGTTAATAGTGGAGCTAAATTGAAGACTAATCATCAAGATGAAATGAAGCACCTTGATTTGTCACTTAAGCTCTGA 870 0.3839 MERQSKEINTIFSVPETPPSPCTPLQNPNEKKQQQSVEEEEEEKEKKLDSLLDLNVSGDDFDFLRCSSEGLELNLITCLDVDDSTTKANSFSGNTLSSDGSESEQPEPRVFSCNYCQRKFYSSQALGGHQNAHKRERSIAKRGHRFGTQIISSASAFGIPFMHSHRYATWNSFCNNNNNNKALGIQAHSMIQKPSQGSSNGFGSSSFHHNGWSRPLIGQQPGIAKLAMADNFHRAVSSRGGSVGRFELANTMMNSAANKEISGYLVNSGAKLKTNHQDEMKHLDLSLKL* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1217 289 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 5 289 IPR044246 GO:0009788
Aev07g1217 289 MobiDBLite consensus disorder prediction 1 46 - -
Aev07g1217 289 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 289 - -
Aev07g1217 289 SUPERFAMILY beta-beta-alpha zinc fingers 108 138 IPR036236 -
Aev07g1217 289 ProSiteProfiles Zinc finger C2H2 type domain profile. 111 138 IPR013087 -
Aev07g1217 289 ProSitePatterns Zinc finger C2H2 type domain signature. 113 133 IPR013087 -
Aev07g1217 289 Gene3D Classic Zinc Finger 87 156 - -
Aev07g1217 289 Coils Coil 30 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1217 Aev-Chr7 10756470 10757339 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1217 72 289 C2H2 Transcription Factor Family AT5G25160 42.857 3.53e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev07g1217 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1217 - - lja:Lj5g3v0526470.1 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1217 07 10756470 10757339 Aev08g0558 08 3186625 3187425 PCT