Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1197 ATGAGAAGGAGAGAAGAGGAGGAAATGAAGAAGAAAAAGAAGAAAATGAGAGGGGGAGGGAGAGAAGCTTTTGAGTTCCTGGAGCGTGAAGGTTGGGTGGTGGTGCGTTCCGCTTTCATCGCCGGAGTCGTGGCCGCGTGTTTAGTGGGCGGCGTTCATGTCGAGTGTAGGGGCTCCGATGAGGTTGAAATGGCAGAAGAAGTGAGTATGACTTCAGCAATACATACTGAAAATGATGCGAGTGAGCAGCATAGTAGTGATGGATCAGCTGTAGAAAGTTCTGCCCCGAGTGGTTCCGATCTAATAGAAAAAGAGTTTGCAAACCTGGATGAGGCTTATAGTTACTATGTTACATATGCTCGGTTTGCAGGATTTGGTGTTAGAAAGGGCGATGTAGGGCGTGATAAGAGGGGAGTCATTACAAGAAGAATTTTTTTTTGTTGCAAGCAGGGGTTACGAGAGAAAAAACACTATGAGCGAGATGGTCGTAAGCGGGAAGCAAAGGCAGAAACACGTACAGATTGTAAAGCTCGGTTGGTAGTTTCGTTGCAGAAAGGGGAGTCGGTGTGGAAAGTGACCAAGTTCGTGGAAGATCACAACCACGAGTTAATGCCACAAAATTTTGTTCATCTAATTCGTAATCATAGACACATATCTAAAGGCCACAAGGCACAAATTGCATCGATGCATCGGCATGGGATGAAATCGTCTAAAATAATGGGTTTTCTTGCCGGACAAAGTGGAGGATATGGTCGGATTGGGTTTTGCAAAAAGGACTTGGCGAATTTCATTGAGAGTGATAGGATTAGGAAAATTTTACATGGTGATGCTGATGCAGCATTAAGTTACTTGGAAGGAAGAGCAGATGTGGATGGCATGACCGTTGCGAGAAGAATAGGTATAAGAAGCCTCTTGAATTTCTCTGGTCAAACCATCATAGGCAAACAGCATATTTGGTTATGCCTTGTGGTAGATGAAATGATTGAGACATACCAGTGGCTGTTGGAGCAGTTTTTAGAAGTGATGGCTGATAAGCAGCCATCTGTTGTTGTAACAGATGGGGACGAGGCTATGAAGGAGGCGATTAAAAGGGTTTTTCCTAGTGCAACCCACCGGTTGTGTGCGTGGCACTTGAATAAAAATGTCGTGGCAAACGTCAAGAATGATGATTTTACTTCAGCCTTTAAAGTGTGTTGTTATGCAAACTTTAAAGAAGACGAATTCCTACAATTCTGGGGGAAATCTGTTTCAAGGTGCGGGGTGAGTGAAAATGCGTGGATACGTGGATTGTTTGAAAAAAAGGAAATGTGGGCTGCTGCATATTTGCGTGACAAGTTTTATGCTGGGGTAAAGACCACCTCCCGTTGTGAGGGGTTAAATGGTCAAGTTAAAAGATTTGTTCGGTCACAGTGTAGCATACTTGAACTTGTACAAAATATTGAAAGAGCTCTAAAAGATCTCCGCAACAATGAACTAGAAGCTCTATTTCAGTCAATTTATACCCACCCGGTGTATGACACTGGACTCCATTCTATTGAGGTTGCTGCTGCGAAGGTTTACACGAGGAAGATATTCAAGGAGGTTAAGCAACAAATTTTGGCAATCTCTTCTGTGATCATGGTAAGCCGTGACAGAATTTGTACGACAGTTAAGTACCAATTGTGTAAATTCGGTGAACCCAATAGGTTGTTCGATGTTTTTTGTGACAAGGTTGGTGATGAGAAAGGACCGATGATTTCATGTGATTGTTGCTTTTGGAGGATGGAAGGGATTCCTTGCAGCCACATTTTTTATGTGATGAAAGAAGAGCACATACCGGAGTTGCCATCTAGCTTAGTCTTGAGAAGGTGGCGGAAAGATGCTAAGACCTTTCATGATGATGAAGAGAGTGATGAGGATTCTATGAAGCGTCAATTGTTGAGGTATGGTGCATTAGCTTCAGCGAGTTTATGGATGTCTTTCTTGGCATCAAAGAGTGGACCGTACTTCAAGAAAGCTATGAATATGGTCATTGGTGTGACAAATGATCTTGAAGTAAGACATGCTGAGGATGGAGGTTCGGGCCTTGGTTCAGGTGGTTTGAAACGGGTTCGCGATCCGACTATTTCAAAGACAAAGGGTGCTCCGAAACTTAGCAAACGTGATGGGAGAAAGAGGTTGTGCTCAAATTGTTCCAAGGTTGGGCACACAAAGAGGACCTGCCCAAACATACATAATTATGATGTCGGAAGTGATGATGACTACATGGAAGACCCACATAGCAATGAAGACAGTTGCCACAGACAGAGTGCAGCACATGAGACTGGTTCATCTAGAAGAAGGATGACATCACAATCTGATATGCATTCAATAGATGGTGTACTATGCCAAATGGGTTCAGCTCCTTTTGTGCCGAATACATATGGAAATATGTTCTTTGGGGGGCAATACATAAACCAAATATTTCCACCAGGCCGCACTGAAGGTGACACTATGTTGCATTCTCGGCCGTCTGAAACTGCATTTGTTCATAATATGGCTCCACCAAAGTTTGCTCGACAAGGTTCAGTAGATCCTGGACACCAATATATATTGCAGCAATTTATGCAGAGAGGCAACAACAACAACATACCGTAA 2616 0.4335 MRRREEEEMKKKKKKMRGGGREAFEFLEREGWVVVRSAFIAGVVAACLVGGVHVECRGSDEVEMAEEVSMTSAIHTENDASEQHSSDGSAVESSAPSGSDLIEKEFANLDEAYSYYVTYARFAGFGVRKGDVGRDKRGVITRRIFFCCKQGLREKKHYERDGRKREAKAETRTDCKARLVVSLQKGESVWKVTKFVEDHNHELMPQNFVHLIRNHRHISKGHKAQIASMHRHGMKSSKIMGFLAGQSGGYGRIGFCKKDLANFIESDRIRKILHGDADAALSYLEGRADVDGMTVARRIGIRSLLNFSGQTIIGKQHIWLCLVVDEMIETYQWLLEQFLEVMADKQPSVVVTDGDEAMKEAIKRVFPSATHRLCAWHLNKNVVANVKNDDFTSAFKVCCYANFKEDEFLQFWGKSVSRCGVSENAWIRGLFEKKEMWAAAYLRDKFYAGVKTTSRCEGLNGQVKRFVRSQCSILELVQNIERALKDLRNNELEALFQSIYTHPVYDTGLHSIEVAAAKVYTRKIFKEVKQQILAISSVIMVSRDRICTTVKYQLCKFGEPNRLFDVFCDKVGDEKGPMISCDCCFWRMEGIPCSHIFYVMKEEHIPELPSSLVLRRWRKDAKTFHDDEESDEDSMKRQLLRYGALASASLWMSFLASKSGPYFKKAMNMVIGVTNDLEVRHAEDGGSGLGSGGLKRVRDPTISKTKGAPKLSKRDGRKRLCSNCSKVGHTKRTCPNIHNYDVGSDDDYMEDPHSNEDSCHRQSAAHETGSSRRRMTSQSDMHSIDGVLCQMGSAPFVPNTYGNMFFGGQYINQIFPPGRTEGDTMLHSRPSETAFVHNMAPPKFARQGSVDPGHQYILQQFMQRGNNNNIP* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1197 871 MobiDBLite consensus disorder prediction 745 779 - -
Aev07g1197 871 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 322 680 IPR031052 GO:0006355
Aev07g1197 871 PANTHER OS02G0262500 PROTEIN 99 291 - -
Aev07g1197 871 MobiDBLite consensus disorder prediction 699 715 - -
Aev07g1197 871 Pfam FAR1 DNA-binding domain 114 205 IPR004330 -
Aev07g1197 871 ProSiteProfiles Zinc finger CCHC-type profile. 721 736 IPR001878 GO:0003676|GO:0008270
Aev07g1197 871 MobiDBLite consensus disorder prediction 77 96 - -
Aev07g1197 871 SMART 26again6 579 606 IPR006564 GO:0008270
Aev07g1197 871 Pfam MULE transposase domain 304 381 IPR018289 -
Aev07g1197 871 MobiDBLite consensus disorder prediction 684 715 - -
Aev07g1197 871 Coils Coil 473 493 - -
Aev07g1197 871 MobiDBLite consensus disorder prediction 745 768 - -
Aev07g1197 871 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 99 291 IPR031052 GO:0006355
Aev07g1197 871 MobiDBLite consensus disorder prediction 77 97 - -
Aev07g1197 871 PANTHER OS02G0262500 PROTEIN 322 680 - -
Aev07g1197 871 SUPERFAMILY Retrovirus zinc finger-like domains 712 739 IPR036875 GO:0003676|GO:0008270
Aev07g1197 871 ProSiteProfiles Zinc finger SWIM-type profile. 564 604 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1197 Aev-Chr7 10519766 10527077 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev07g1197 FAR1 5.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1197 - - ahf:112717474 550.051