Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1189 ATGGGGAAGCCAACTGGGAAGAGGAAGGATTATGAAAGTCCAAAGGCACAAACTGCTAATAAGGCTGGTAATAAGGCTATGATGATGGATCGTTCCAATTCAAAAGGGTTTGATGATGACACTGCAATGTTCATCAACATGTCAAATGATCTCAAGGAAGAAGGTTACAGATTATTCCAGAGGAAGGACCATGAAGGTGCCATGTTGAAGTTTGAGAAATCCCTTAAGCTTCTCCCAAAAAATCATATAGATGTTGCACACCTTCACACAAGTATGGCCATGTGTTACATGCAAATGGGTCTCGGTGAGTACCCTCGAGCGATTACCGAGTGCAATTTGGCATTGGAGGTTTCACCTAGGTATAGCAAGGCCCTGTTGAAGAGGGCAAAGTGTTATGAGGCGTTGAACCGGTTGGATTTGGCAATGAGGGATGTTAGGATTGTTCTTAATTTGGAGCCGAATAACCTTACCGCATTGGAGATCTTGGATAGTTTGAGGAGTACAATGGATGAAAAAGGGATCACTATTGATGAGACTGAGATTGCTTTGTCTACTATGCAGGAGCCTCCAGGGGCACGATTGAGGAACGTGGTGACCAAGCTGAAGAAGAAGAAAGCAAACAAGAGTGAGGACAATGAAGAGGATAAGGAGGTTGTGGAGGTGAATATCAATGCTGCTTATGTTAAGGATAAGGAAGTTGTCAAGAAAACAATTGAAAAAGAAAATTCGGTAAAGAAACCTGCCGCGCAAGAAAAGCCTGTTACAAGGACGGTGAAGTTGATATTTGGAGAGGATATAAGATGGGCCCAACTTCCAGTGAATTGTAGTGTGAGAGTGGTGAGGGATACGATAAAGGATAAATTCCCAGGGTTGAAGGGTGTTCTTGTTAAGTATAAAGATCGAGAAGGAGATTTGGTTACAATCACCACTAATGCTGATCTGAGGTTAGCCGAGACTTCTGGTCATGTGCTCGGCTCAATTCGGCTTTATATTACTGAAGTTGATCCTAATCAAGAACCATCTTATGGTGAAACAACCAACAGGGGTGAGTTGCAGACACATGGCAGAAAACTGGGTGATGGTATTGAGGATGGAGATATGGTAGATGGAGAACACAAAGAAAATAGAATGATAACTGTGGAGGACTGGCTTGTCCAGTTTGCAAGGCTTTTCAAGAATCATGTTGGGTTTGACTCTGATGCATATCTAGATATTCATGAGATTGGAATGAAGCTATATTCCGAAGCAATGAAGGATACCGCGTCGAATGGCGATGCTCAAGAGCTGTTTGACATCGCTGCTGATAAGTTTCAAGAAATGGCAGCTTTGGCATTATTTAATTGGGGGAATGTTCACTTGTCAAGGGCGAGAAAGCGAGTGTCAATTCCAGAAGATGGATCGAGAGAATCTTCTTTTGAGCATATGAAAGCCGCGTATGAGTGGGCTCTAAAAGAGTACTCAAAGGCAGAAATGAGATACGAAGAAGCTTTGAGAATCAAACCCAACTTTTATGAAGGACTTCTTGCGCTTGGCTATCAGCTGTTTGAACAAGCAAAGCTCTGTTGGTGTTATTCAGTTGCAAACAATAATGACTTACAAACGAGCCTGTCTGAAGAGGTTCTGCAGCTCTATAACAAGGCAGAGGACTGCATGGAGAAGGGCATGATGATGTGGGAAGAGATCGAGGAGCAGCGTTTGAATGGATTATTGAAATTAGATAAATGTAAAGCGCAATTAGAGAAAATTGGTTTGCACAATCTTTTCAGGGATGTTTCTTCTGAGGAAGCTGAAGAGCAGGCTGCAAAGATGAGGTTACAAATATATCTTTTATGGGGTACCTTATTGTATGAGCGTTCAGTTGTGGAATACAGGATAGGCCTACCGACATGGGAGGAATGTTTGGAGGTTGCAGTTGAAAAGTTTGAACTAGCTGGAGCTTCTTCGACGGACATTGGTGTCATGATAAAGAACCATTGTTCTAATACAACAGCACTGGAAGGATTTAAAATCGATGAGATAGTGCAAGCGTGGAATGAGATGTATGATGGGTGGCAGTTTGATGTTCCATCATTTCGACTTGAACCATTGTTTCGTCGTCGTGTTCCTAAACTACATTACATCTTGGAGCAAGTTTAA 2136 0.4232 MGKPTGKRKDYESPKAQTANKAGNKAMMMDRSNSKGFDDDTAMFINMSNDLKEEGYRLFQRKDHEGAMLKFEKSLKLLPKNHIDVAHLHTSMAMCYMQMGLGEYPRAITECNLALEVSPRYSKALLKRAKCYEALNRLDLAMRDVRIVLNLEPNNLTALEILDSLRSTMDEKGITIDETEIALSTMQEPPGARLRNVVTKLKKKKANKSEDNEEDKEVVEVNINAAYVKDKEVVKKTIEKENSVKKPAAQEKPVTRTVKLIFGEDIRWAQLPVNCSVRVVRDTIKDKFPGLKGVLVKYKDREGDLVTITTNADLRLAETSGHVLGSIRLYITEVDPNQEPSYGETTNRGELQTHGRKLGDGIEDGDMVDGEHKENRMITVEDWLVQFARLFKNHVGFDSDAYLDIHEIGMKLYSEAMKDTASNGDAQELFDIAADKFQEMAALALFNWGNVHLSRARKRVSIPEDGSRESSFEHMKAAYEWALKEYSKAEMRYEEALRIKPNFYEGLLALGYQLFEQAKLCWCYSVANNNDLQTSLSEEVLQLYNKAEDCMEKGMMMWEEIEEQRLNGLLKLDKCKAQLEKIGLHNLFRDVSSEEAEEQAAKMRLQIYLLWGTLLYERSVVEYRIGLPTWEECLEVAVEKFELAGASSTDIGVMIKNHCSNTTALEGFKIDEIVQAWNEMYDGWQFDVPSFRLEPLFRRRVPKLHYILEQV* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1189 711 ProSiteProfiles TPR repeat profile. 48 81 IPR019734 GO:0005515
Aev07g1189 711 PANTHER PROTEIN PHOX4 1 710 - -
Aev07g1189 711 SUPERFAMILY TPR-like 412 519 IPR011990 GO:0005515
Aev07g1189 711 MobiDBLite consensus disorder prediction 1 15 - -
Aev07g1189 711 Gene3D Tetratricopeptide repeat domain 45 173 IPR011990 GO:0005515
Aev07g1189 711 Gene3D Tetratricopeptide repeat domain 406 581 IPR011990 GO:0005515
Aev07g1189 711 PANTHER PROTEIN CLMP1 1 710 IPR044517 -
Aev07g1189 711 SUPERFAMILY TPR-like 45 165 IPR011990 GO:0005515
Aev07g1189 711 SMART tpr_5 470 503 IPR019734 GO:0005515
Aev07g1189 711 SMART tpr_5 122 155 IPR019734 GO:0005515
Aev07g1189 711 SMART tpr_5 86 121 IPR019734 GO:0005515
Aev07g1189 711 SMART tpr_5 48 81 IPR019734 GO:0005515
Aev07g1189 711 ProSiteProfiles PB1 domain profile. 255 334 IPR000270 GO:0005515
Aev07g1189 711 Pfam PB1 domain 255 331 IPR000270 GO:0005515
Aev07g1189 711 MobiDBLite consensus disorder prediction 338 368 - -
Aev07g1189 711 MobiDBLite consensus disorder prediction 350 368 - -
Aev07g1189 711 CDD PB1 257 331 - -
Aev07g1189 711 ProSiteProfiles TPR repeat profile. 122 155 IPR019734 GO:0005515
Aev07g1189 711 SMART PB1_new 255 334 IPR000270 GO:0005515
Aev07g1189 711 MobiDBLite consensus disorder prediction 1 32 - -
Aev07g1189 711 Gene3D - 255 329 - -
Aev07g1189 711 SUPERFAMILY CAD & PB1 domains 250 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1189 Aev-Chr7 10307620 10309854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1189 37 155 Calmodulin-binding Proteins AT3G25230 28.125 1.30e-06 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1189 07 10307620 10309854 Aev07g1189 07 10307620 10309854 ECH
Aev07g1189 07 10307620 10309854 Aev08g2570 08 24360491 24362823 PCT