Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1066 ATGGACGATGAAAGTGACAGCTACGGTCCTCGTACCGTCGAAGAGGTTTTCGAGGATTTCAAGGGTCGCCGTAATGCCTTGATCAAGGCACTCACCACTGATTATAAAGAGTTCTTTAAGAAGTGTGATCCCGAAAAGGACAATCTTTGCCTCTATGGGCACCCTACTGAGGAATGGGTAGTGGATATGCCTGTTGAGGAGGTTCCACCCGAGATTCCGGAGCCAGTGCTGGGTATTAACTTTAACAGAGACGGGCTAGATGAACAGAAGTGGCTGTATATGGTTGCTTCTCACAGTGATTCTTGGATACTTGCTGTGGCTTTTTATTTTGGTGCTAGAGTCGGATTTGATAAGGCTGATAGGAAGAGGCTATTCACTATGATAAATGATCTTCCAACTATACTTGATGTTGTTAGAGGGATTGACAAGAAACAAGGAAAGGAAAAGCCATCAGTTTCTAATAACCACAGCAGTAACAAATCCAAATCAAACTCTAAGTGTGGTTCCGAATTGCAGGCGAAGCGTGCTAAAGCAACAAAGTCAAATGATGAGGATGATGAGGAAGAGGGAGATACTCCGTGCGGGGCATGTGGAGACAGCAAGGACAACGGGTTCTGGATTTGCTGCGATGCCTGTGAGAAGTGGTTCCATGGAAAGTGTGTGAAGATCTCCCAATCTAAGGCTCAGCATATCAAGCAGTACAAATGTCCATCTTGCAGCAACAAGAGAGCTAAGCATTGA 741 0.4521 MDDESDSYGPRTVEEVFEDFKGRRNALIKALTTDYKEFFKKCDPEKDNLCLYGHPTEEWVVDMPVEEVPPEIPEPVLGINFNRDGLDEQKWLYMVASHSDSWILAVAFYFGARVGFDKADRKRLFTMINDLPTILDVVRGIDKKQGKEKPSVSNNHSSNKSKSNSKCGSELQAKRAKATKSNDEDDEEEGDTPCGACGDSKDNGFWICCDACEKWFHGKCVKISQSKAQHIKQYKCPSCSNKRAKH* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1066 246 Pfam Alfin 12 139 IPR021998 GO:0006355|GO:0042393
Aev07g1066 246 SMART PHD_3 193 240 IPR001965 -
Aev07g1066 246 MobiDBLite consensus disorder prediction 151 170 - -
Aev07g1066 246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 183 241 IPR013083 -
Aev07g1066 246 ProSitePatterns Zinc finger PHD-type signature. 194 239 IPR019786 -
Aev07g1066 246 Pfam PHD-finger 194 242 IPR019787 -
Aev07g1066 246 PANTHER CPG BINDING PROTEIN 6 245 IPR045104 GO:0006355|GO:0042393
Aev07g1066 246 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1 6 245 - -
Aev07g1066 246 SUPERFAMILY FYVE/PHD zinc finger 180 243 IPR011011 -
Aev07g1066 246 MobiDBLite consensus disorder prediction 145 193 - -
Aev07g1066 246 CDD PHD_AL_plant 193 242 IPR044104 -
Aev07g1066 246 ProSiteProfiles Zinc finger PHD-type profile. 191 242 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1066 Aev-Chr7 8100384 8103538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1066 1 245 Alfin-like Transcription Factor Family AT3G42790 60.714 3.91e-98 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev07g1066 Alfin 2.8e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1066 - - tcc:18588119 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1066 07 8100384 8103538 Aev07g1066 07 8100384 8103538 ECH