Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1052 ATGGCAGCAGCAACCAGAAATCTACGAATTCTCCGAAGAAACCATTTTTTCCACTTTCGATTCTTCTCCACAATTTCTTCTTCTTCTTCTTTCACGAACGACGAATCTCGTTACCGTAAACAAATATCCCTCGCAAACCTCTTCCAAAGGTACGGTTTCCCATCTTCCCAAATCCCCCAATTCCTCTCCCAAAGCCCTTTTCTCTTCCACACCCAATTACCCAATCTCCAAAATTCCCTTTCTACGCTCTTCTCCCTTCGAATTCCCCAAAATACCCTCATCTCCCTCATCCGCAACAACCCCTCCATCTTGCAGCACAACTGGAGCAACGAAAATAATGAAAAAAACGATTTTTTATCGAAACTCCTTTCGTCAAACGCTTCTCCGTCAATGATCGCGAACTTACTGGAATGTTCTAGAAGGTTCGAGCTAGACCCTGTAGAAGCTTCCAAGAAAATTAACGAGACATTGCAAAGGTTAGGGTTTTCTGACGAAGTTATAGCTAGGGTTTTGGAAGTGTTCCCAAGCGTGATCGTCGTGTGTGAGAGGGAAATTGCTCAGGTTGTTGAGTTTCTAGTCGAGGTTGTTGGGATTAATAGGGATGTTGTTGTTGATAGGGTCGTGAGATTGAACCCTAGGGTTTTGGGATTTGGGGTTCAGGATAAGTTGATGCCTTTGGTTCGCGAATTGAGGGAATTAGGGTTTTCAGGGCGCGAGATAAGGGGAGAGATTGTTCGTGAGCCTAGGGTTTTAGCTATGGAGATTGGGGAAACCTCGAGGATTTTGAGGTTGTTGGAGGGTTTGAAGTGCAGGGAAGGGATTAAAGAGAGGATCTTTGAGAAAGGTTTGTTGAGGGCTTGCTTTGAGGTGAAGCTTAGAGTGGATTGCTTGTGTTTGCATGGTTTGATTCTGAGGGATGCTTTGAAAGTGCTGTGGAAGGAGCCGAGGTTGATAACCTATGGCGTCGAGGAAATCGTGGAGAAGATTCGGTTTCTGGTGCATAGGATGAATTACAGTGTTGATTGTTTAGTTGATGTTCCTGAGTACTTGGGTGTGAACTTTGAGAAGCAGATTGTGCCTAGGTACAATGTGATGGAGTACTTGAGAGCAAAAGGTGCAATTGGTTTCAATGTTGGGTTGAAGGATATGGTGAAGCCAAGTAGGCTTAGGTTTTACAATCTTTATGTTAAGCCGTATCCAGGCAGCGAAAAGATTTACGGGCGATTCGCAACTGAAGTTGTTGGAGTCAAGAAGAGCAAGCATCCTGCTGGTCTCTGGAAACTCTTGAAGCCTCAGAAGTTCCCCAAGACCGATGAAGATGCCAAGAACTTGAGGGCATTCATGGACTCAGTGTAG 1356 0.4484 MAAATRNLRILRRNHFFHFRFFSTISSSSSFTNDESRYRKQISLANLFQRYGFPSSQIPQFLSQSPFLFHTQLPNLQNSLSTLFSLRIPQNTLISLIRNNPSILQHNWSNENNEKNDFLSKLLSSNASPSMIANLLECSRRFELDPVEASKKINETLQRLGFSDEVIARVLEVFPSVIVVCEREIAQVVEFLVEVVGINRDVVVDRVVRLNPRVLGFGVQDKLMPLVRELRELGFSGREIRGEIVREPRVLAMEIGETSRILRLLEGLKCREGIKERIFEKGLLRACFEVKLRVDCLCLHGLILRDALKVLWKEPRLITYGVEEIVEKIRFLVHRMNYSVDCLVDVPEYLGVNFEKQIVPRYNVMEYLRAKGAIGFNVGLKDMVKPSRLRFYNLYVKPYPGSEKIYGRFATEVVGVKKSKHPAGLWKLLKPQKFPKTDEDAKNLRAFMDSV* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1052 451 Gene3D Transcription termination factor 3, mitochondrial 205 410 IPR038538 -
Aev07g1052 451 Gene3D Transcription termination factor 3, mitochondrial 36 204 IPR038538 -
Aev07g1052 451 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL 56 449 - -
Aev07g1052 451 SMART mt_12 241 271 IPR003690 GO:0003690|GO:0006355
Aev07g1052 451 SMART mt_12 168 199 IPR003690 GO:0003690|GO:0006355
Aev07g1052 451 SMART mt_12 340 374 IPR003690 GO:0003690|GO:0006355
Aev07g1052 451 SMART mt_12 205 236 IPR003690 GO:0003690|GO:0006355
Aev07g1052 451 SMART mt_12 308 339 IPR003690 GO:0003690|GO:0006355
Aev07g1052 451 PANTHER CGI-12 PROTEIN-RELATED 56 449 IPR003690 GO:0003690|GO:0006355
Aev07g1052 451 Pfam mTERF 132 255 IPR003690 GO:0003690|GO:0006355
Aev07g1052 451 Pfam mTERF 46 126 IPR003690 GO:0003690|GO:0006355
Aev07g1052 451 Pfam mTERF 293 391 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1052 Aev-Chr7 7969830 7971185 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev07g1052 mTERF 2.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1052 - - cam:101513737 525.783