Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1030 ATGGAGGGTGGTGGCTCAAGCTCTGGCCCAAACAAGGACACACCCGTGGAGAAGATCATGAGAGATGTGATTCCAGAGGATGTAAGAATCTCAAAGGAAGCAATGGCGACTATAGAGAAAAGTGTGGATGAGTTCATTGCACACATAACTAAAGAGGCGAACGAGCAGTGCAAGAGGGAAGGCAGGACTATGGTCACTAGTGAGGACCTTGTATTGGCTATGTCAAGGCTTGGTTTCGATGAATGTGCTGAGTTTATCACTAAATTCCATAACCAAATTCATGAAAATGTTGGTGCTGGTGCTGGTGCTCATGAGGGTGTGGTTGCTGCTGCTGTTTCTTCAAATGGTAAGGTTATTATTTTGGATGGACCAATTGTAGGTCATGGGGAGAAGGAGAGTGATGAGAGTGATGATGAGTGA 420 0.4548 MEGGGSSSGPNKDTPVEKIMRDVIPEDVRISKEAMATIEKSVDEFIAHITKEANEQCKREGRTMVTSEDLVLAMSRLGFDECAEFITKFHNQIHENVGAGAGAHEGVVAAAVSSNGKVIILDGPIVGHGEKESDESDDE* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1030 139 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 16 95 - -
Aev07g1030 139 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 16 95 IPR027113 GO:0001228|GO:0006355|GO:0016602
Aev07g1030 139 SUPERFAMILY Histone-fold 16 107 IPR009072 GO:0046982
Aev07g1030 139 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 74 IPR003958 -
Aev07g1030 139 Gene3D Histone, subunit A 13 113 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1030 Aev-Chr7 7719642 7721367 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1030 16 95 CCAAT-HAP3 Transcription Factor Family AT1G21970 45.000 5.03e-20 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aev07g1030 CBFD_NFYB_HMF 9.1e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1030 K08065 - smo:SELMODRAFT_450069 77.7962