Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1017 ATGGAAGAAGAAGGATTAGTTAGAGCGAAGAAAGAAGAAGAAACAGTGACATTTGCAGCAAAAACATCAACTTCTTCTTCTTCTGATTGGTCTTTGAATGCAAAACCAAGGGAAGGTTTGAACGAGGTGGGCCCACCACCGTTTCTAACGAAGACGTATGAAATGGTGGAAGACCCTTCAATGGATTCCATTGTTTCTTGGAGCAGTGCTCGTAACAGCTTCGTTGTGTGGGACCCTCATCAATTCTCCACAACTCTGTTGCCTCGCTACTTCAAGCATTCCAACTTCTCTAGCTTTGTTCGCCAGCTCAACACCTATGGATTTAGAAAAGTTGATCCTGATCGATGGGAATTCGCGAACGAAGCGTTCTTGGCAGGGCAAAAGCACCTATTGAAGACCATCAAGAGAAGAAGAAACGTGTCGCAAGGAATGCAACAGAGAGGAGGTGGTGGAGGAGCTTGTATTGAGGTTGGACAGTATGGGCTAGAAGGTGAGGTTGCGAGGTTGAGGAGAGATAGGAACGTGTTGATGACGGAACTCGTGCGGCTGAGGCAGCAACAGCAGAACTCGAGGGACCAAGTGATCACGATGGAGGCGAGACTGCAAGCCGCAGAGAAGAAACAGCAACAGATGATGACTTTCCTTGCAAAAGCATTGAATAATCCGTCTTTCATGCAGCAATTAGCACAAAATAACTCAAACAACTCGCAATTGCTCGACATCGAAATCAAGCGAAAGAGGAGGCTAACCGCAAGCCCGAGCGTGGAGTGCTTACAAGATGATGATCCTGTGACAATGGCAGTTCCTATTGAGCCAGTTGTGGACTATCCAAGCCGCGATGAACAAGATATGGTAAAAATCGAGTCTGAGATGGAGACTTTCTTCTCGACATCATGTGTTGATGAATTCGGCACTGGATCAGTTCCAACAGCTAGTGATGATGCAATCTTGGAGGACTTCCTCAATGAAGACTTGGTAACTGGGAATCCTAAAGATGAAATCGTAATTGGTGATTGTTCAGGAATTGATGTGCCTGTGGAGGATTTCATGGCGAAGCCTAACGATTGGGCCGAGGAATTGCAGAACCTTGTGGATCATATGGGCTATCTTGGTTCTAAACCTTAA 1125 0.4604 MEEEGLVRAKKEEETVTFAAKTSTSSSSDWSLNAKPREGLNEVGPPPFLTKTYEMVEDPSMDSIVSWSSARNSFVVWDPHQFSTTLLPRYFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEAFLAGQKHLLKTIKRRRNVSQGMQQRGGGGGACIEVGQYGLEGEVARLRRDRNVLMTELVRLRQQQQNSRDQVITMEARLQAAEKKQQQMMTFLAKALNNPSFMQQLAQNNSNNSQLLDIEIKRKRRLTASPSVECLQDDDPVTMAVPIEPVVDYPSRDEQDMVKIESEMETFFSTSCVDEFGTGSVPTASDDAILEDFLNEDLVTGNPKDEIVIGDCSGIDVPVEDFMAKPNDWAEELQNLVDHMGYLGSKP* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1017 374 MobiDBLite consensus disorder prediction 1 46 - -
Aev07g1017 374 MobiDBLite consensus disorder prediction 18 34 - -
Aev07g1017 374 Coils Coil 166 207 - -
Aev07g1017 374 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 324 IPR027725 -
Aev07g1017 374 ProSitePatterns HSF-type DNA-binding domain signature. 87 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev07g1017 374 PRINTS Heat shock factor (HSF) domain signature 86 98 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev07g1017 374 PRINTS Heat shock factor (HSF) domain signature 99 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev07g1017 374 PRINTS Heat shock factor (HSF) domain signature 48 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev07g1017 374 MobiDBLite consensus disorder prediction 1 17 - -
Aev07g1017 374 Gene3D - 41 138 IPR036388 -
Aev07g1017 374 SMART hsfneu3 44 137 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev07g1017 374 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 18 324 - -
Aev07g1017 374 Pfam HSF-type DNA-binding 48 137 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev07g1017 374 SUPERFAMILY "Winged helix" DNA-binding domain 44 137 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1017 Aev-Chr7 7573508 7576080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1017 15 374 HSF AT2G26150 52.632 1.93e-129 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev07g1017 HSF_DNA-bind 2e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1017 K09419 - gmx:100778558 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1017 07 7573508 7576080 Aev07g1017 07 7573508 7576080 ECH
Aev07g1017 07 7573508 7576080 Aev08g0470 08 2649351 2650601 PCT