Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1012 ATGTCGAATTTGACATCTACATCAAGTGAAATAAGTGCTTCTTCAGGAACTAGGAATGACACAAGAACAGCTTCTCTCTATCCTCAACAATACTCATCTACTTCAACAATTCAACAAGAACCACAACCCAAAAAGAAGAGAAGTCTTCCAGGCCACCCAGACCCCGATGCTGAAGTGATAGCCTTGAGTCCGAAGAGCCTACTGGCAACAAACCGATTCATTTGTGAGATTTGCAACAAAGGGTTTCAAAGGGACCAGAATTTACAACTGCATAGAAGAGGCCACAATTTGCCATGGAAGTTGAAGCAAAGGAACAACAAAGAAATAGTGAGAAAAAAGGTTTATGTGTGCCCTGAGCCCACGTGCGTCCACCACGAGCCGTCAAGGGCTCTTGGTGACCTCACGGGGATCAAGAAGCACTTTTTCAGGAAGCACGGCGAGAAGAAGTGGAAATGTGACAAGTGCTCTAAGCGCTATGCTGTTCAATCTGATTGGAAGGCTCATTCCAAGATTTGTGGCACTAGAGAGTATAAATGTGGCTGCGGAACCATCTTCTCTAGGAGGGACAGTTTTATAACTCATAGAGCCTTTTGTGATGCATTAGCACAACAAGAGAGTGTTATTAAATCAAACCTAATCACAACCACAATGATGAACCCTCTACTTCTTCATCATCATCATCATACCCATCCACTTCTTCAATCATCATCATCAGTGAAAACAGAACTACAAGATCATAATCATCATCCCAACTTCCTCAACAACCTAAGACCACAACAAATAATTAATACTTATAACAATCCACCTTGGTTGGCCCCACCAACACAACAACCTATCATAGATTTCTCCACCTCATCATCAGCATCACAACCACAAGGACCACCAATACTCCCAACACAACTAGACCACCCTAGTAATAATAACAACCTAATTCCCAATTTGCTTATTCCTTCTAATAATAATAATAGTAACAATTCTAGTCCTCATATGTCAGCCACTGCTTTGTTGCAAAAAGCATCACAAATTGGTGCAACAATGAGTACCCAAACTTCACTACCCCCTCACGTGCTCCATCATCAAGGTCACGTGCCTCATGATGATTATGATGGAAATTGTGCAAAAGTAGGGTTTTATAGCTCCTCCTCTAATTTCTCTACTACTATGGTTCCATTATCTTATGGGAATAATAATAAAGGTGAACAAATCAATGAGTTTGATCATCTAGAATCTTCTTCTAATCCTTTCCATCAAGTGATGATGGGTGGTGATAATAATTGTAACAATAATGATAGCATTATTGATGAAGAACTTGTTACAAAATCAACACAATCATCACAATTTAGTAGAATCAACAAAATGGGTGGTGCTACTATTGGAGGAGGTGCAAGTGCCAATGATGAAATGACAAGAGATTTTTTGGGTCTTAGAGCATTTTCTCAAAGAGATTTGTATAATATATCTGGGATTGATCATCATTTGGGTTCTTCATCATATGATGGAAAGCAAAATCATAACCATGATGAGCCTTGGCAAGGTTAA 1539 0.3964 MSNLTSTSSEISASSGTRNDTRTASLYPQQYSSTSTIQQEPQPKKKRSLPGHPDPDAEVIALSPKSLLATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRNNKEIVRKKVYVCPEPTCVHHEPSRALGDLTGIKKHFFRKHGEKKWKCDKCSKRYAVQSDWKAHSKICGTREYKCGCGTIFSRRDSFITHRAFCDALAQQESVIKSNLITTTMMNPLLLHHHHHTHPLLQSSSSVKTELQDHNHHPNFLNNLRPQQIINTYNNPPWLAPPTQQPIIDFSTSSSASQPQGPPILPTQLDHPSNNNNLIPNLLIPSNNNNSNNSSPHMSATALLQKASQIGATMSTQTSLPPHVLHHQGHVPHDDYDGNCAKVGFYSSSSNFSTTMVPLSYGNNNKGEQINEFDHLESSSNPFHQVMMGGDNNCNNNDSIIDEELVTKSTQSSQFSRINKMGGATIGGGASANDEMTRDFLGLRAFSQRDLYNISGIDHHLGSSSYDGKQNHNHDEPWQG* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1012 512 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 3 488 - -
Aev07g1012 512 ProSitePatterns Zinc finger C2H2 type domain signature. 75 95 IPR013087 -
Aev07g1012 512 MobiDBLite consensus disorder prediction 273 331 - -
Aev07g1012 512 MobiDBLite consensus disorder prediction 1 43 - -
Aev07g1012 512 SUPERFAMILY beta-beta-alpha zinc fingers 72 170 IPR036236 -
Aev07g1012 512 MobiDBLite consensus disorder prediction 277 331 - -
Aev07g1012 512 Gene3D Classic Zinc Finger 54 122 - -
Aev07g1012 512 Gene3D Classic Zinc Finger 126 208 - -
Aev07g1012 512 Pfam Zinc-finger double-stranded RNA-binding 73 95 IPR022755 -
Aev07g1012 512 MobiDBLite consensus disorder prediction 1 58 - -
Aev07g1012 512 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 3 488 - -
Aev07g1012 512 SMART c2h2final6 115 145 IPR013087 -
Aev07g1012 512 SMART c2h2final6 150 170 IPR013087 -
Aev07g1012 512 SMART c2h2final6 73 95 IPR013087 -
Aev07g1012 512 MobiDBLite consensus disorder prediction 229 253 - -
Aev07g1012 512 ProSiteProfiles Zinc finger C2H2 type domain profile. 73 95 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1012 Aev-Chr7 7509276 7513889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1012 1 348 IDZ Gene Family AT1G55110 54.000 6.34e-114 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev07g1012 zf-C2H2_jaz 7.5e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1012 K25870 - vvi:100257789 428.328