Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1006 ATGAGACTTATCGGGGGCTTTCTGTTCCCTGATAAGTCTAGTGCTCGTGTTCACCTGAAATTTCTACCTTTGCTCGAGGATTTCAGGAGATGTGGTCAGATGTGTTGGGGAGGCGCTGTTCTTGCCTGTTTGTATAGGACTATGTGTCGAGCGAAGAAGTACACAGTGACTGACACTGGTTCTTGCTTGTCACTGCTTGTTTCTTGGGCGTACTATCGCATCCCCTCACTACGACCGGCACATTTTGATGATCTTTTCTTTCCGCTCGCTGGGAGGTGGGGCGGTCTCCGGTCATCTCGCGGAGATAACAGTGCACGGTTGGTGCAGTATCGACGGATACTGGATTTCATCTCTATGGATGGGTTCCGATGGACACCATATTCTAACATGGACGTGATGCAGATTGTTCCGGATCATGTCCAGCAGCACTCTGTGCTGTTTCGTTCAGTTATTCCCTTGCTTTCGTTCGAGATAGTAGAGTATCATCAGCCTGATCGTGTGTTGAGGCAGTTCCACATGATGCAGCATATCCCATCTCCTCCGGCTGACCTCAGCCGCGTTCATGGCATTGATGGGAGAGGACGTCCCTCGAGATGGTGGCCGAGGGAGCACAGAGATTATTATGATATATGGGGAGATCGATACGATCGTGTGTTCACTGGGATGATGACACATGATTATCGTCCTTCAGCAGAGTATCTTCAGTGGTGGTCCTTGAGTCCGTTTAGATATCTAGGCGGAGGTCCCCCTGGCCCAGACGAGATCCCTCCAGGGTTGCCTGATGGAGTTGGCCTTGGTGCAGGTCCTCAGATTCCACACCCACCAGCAGCCCCTGATAGGAGACGTGCACGCACGAGAGCACGGACGGGCACACGTCAGAGCAGACGCCAGTACCCTATTGGGACTGCGGATGTGGGTGACTACTTTATTCCGCGCCAGACCCAGACTCAGACGCAGTCGCAGACTCGGCCGCAGTCCCGGAGTAGTACCCAGATACCGTCGCAGTCCCAGTTGCCCCAGCAGTCGCATGTCGCACCGGATACGCAGACAGAGATGCACTTTGAGTCTAGGGTAGCTGCTGGAGGATCTATGTTTTTTGCTGGATTATCGTCAGATTGGAGGAGTGGTCCTGGGAAGAGCTCGCGCGATGCACCTGGATCGAGCTCGCGTGATGCACCTGGATCGAGCTCGCAGGCTGCAGCAGGGGAAGACAGTGATTGTTATAGGCCGACGATGGAGTCAGTGGACGATATTGGTATATCCATCACTGATGATGATCTTGATATGTTTGATGCATATCTTCGTCGACAACTCCATAGCGGTGAACCTATTCCTTACAATGTAACGGTGGTATGGATAAGATCGGAAATTGAAGAAAAAACTGAACTTACACCGACATTTGCAGAAAAATATCGAAGACGATTACCTACTCAAATCAAATTGAAAACTCCGTCCGGAACAGAATGGCAAATAAAATGTGCAAAAAGAGGTGACAAGGTATGGTTCACAGACGGTTGGAAGGATTTTGTACAACATTTTTCAATGTGTTATGGTTACACGGTATGGCTCCACTATGATGAAGAAAATACATTTGACGTTGAGACATTGACGAAAATGAGGTTGAAGTCTCGTACGACTCTGAAGGAGATGAAGGAGACAGTAGTTTAG 1668 0.4988 MRLIGGFLFPDKSSARVHLKFLPLLEDFRRCGQMCWGGAVLACLYRTMCRAKKYTVTDTGSCLSLLVSWAYYRIPSLRPAHFDDLFFPLAGRWGGLRSSRGDNSARLVQYRRILDFISMDGFRWTPYSNMDVMQIVPDHVQQHSVLFRSVIPLLSFEIVEYHQPDRVLRQFHMMQHIPSPPADLSRVHGIDGRGRPSRWWPREHRDYYDIWGDRYDRVFTGMMTHDYRPSAEYLQWWSLSPFRYLGGGPPGPDEIPPGLPDGVGLGAGPQIPHPPAAPDRRRARTRARTGTRQSRRQYPIGTADVGDYFIPRQTQTQTQSQTRPQSRSSTQIPSQSQLPQQSHVAPDTQTEMHFESRVAAGGSMFFAGLSSDWRSGPGKSSRDAPGSSSRDAPGSSSQAAAGEDSDCYRPTMESVDDIGISITDDDLDMFDAYLRRQLHSGEPIPYNVTVVWIRSEIEEKTELTPTFAEKYRRRLPTQIKLKTPSGTEWQIKCAKRGDKVWFTDGWKDFVQHFSMCYGYTVWLHYDEENTFDVETLTKMRLKSRTTLKEMKETVV* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1006 555 PANTHER PROTEIN MAIN-LIKE 2 1 244 IPR044824 GO:0010073|GO:0048507
Aev07g1006 555 MobiDBLite consensus disorder prediction 371 411 - -
Aev07g1006 555 Pfam Plant mobile domain 3 238 IPR019557 -
Aev07g1006 555 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 LONG FORM HOMOLOG ISOFORM X1 1 244 - -
Aev07g1006 555 Gene3D - 447 539 IPR015300 -
Aev07g1006 555 MobiDBLite consensus disorder prediction 374 402 - -
Aev07g1006 555 ProSiteProfiles B3 DNA-binding domain profile. 446 539 IPR003340 GO:0003677
Aev07g1006 555 SUPERFAMILY DNA-binding pseudobarrel domain 452 534 IPR015300 -
Aev07g1006 555 CDD B3_DNA 467 534 IPR003340 GO:0003677
Aev07g1006 555 Pfam B3 DNA binding domain 463 531 IPR003340 GO:0003677
Aev07g1006 555 MobiDBLite consensus disorder prediction 248 350 - -
Aev07g1006 555 MobiDBLite consensus disorder prediction 309 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1006 Aev-Chr7 7451907 7454580 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1006 443 533 B3 DNA Binding Superfamily AT3G18990 27.473 8.01e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev07g1006 PMD 2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1006 - - ahf:112790891 226.483