Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0979 ATGTCAATGGATAATGATTTGTACATTGCTCCACTGAACATGGCTGGTCATAGTTCAACTGTCATAGATCATGAAATTACACAAAAGCCCCTTCTTCATTGCTATTCATTTGACCTTAATAACCAAAACCATATCATAAATGGGATTCCAATGCTTTCTGGGGAGCAATGTGAGCCTATAAGTAATGTCCATGTTGGTAGCTTCATGAATTCTTCAAGCATTGGTGACACTAACTCATTTCTTACATCACAACAAGGGAAGAACATTGTGGGAGAAGCCTCAAACCACATCGGAAATAGCGAGTTTCATGAGCATTTAGCCGGAGGAACCTCGAGTACACCTGCTTCACTTGCAGCCATTCTTGCTGCTAGAATTGGCCTTCAAGAGAATCTAGAGAATTCGGCGAATTTTTCTCCTTCGCTCGGTCCATTCGAGGCGTTAGGGTCATATGTGTTCAATAATTGGCAGGATAATTCAAATCCTCTGTCTGCGAATTTCAGCGATCGCGGCGGATACAATGAATCTGGTAATGGAAAATGGAAGGTTGTGAACAAGTTTCTGAAAGCTCCAGAGGTAGATGGGGCCGGATTCCTACCTTATTCGTCTATAGGAAACATTGATCATGATGGATGGACATCACTAAGTGTTGCAAACTTGGCTAATCATGCTTACAATTCCTCTAATTATAGCAATGAGCTATCATTAAGTCTCGCCACATCACCAACCGCCGGTCAGTGCTCGGAGATGAGTGGCTCGGATGTGAGCTGTAGCATGAATGAAACAAGGACAGGGTTGGAGAAAGCCTCTTGTAGCAGTAGTAGGGAACTGTCTATGAACTTAGGTTCTGATAAACATGTCCGGTTTTCGCCATCGATACTAGGATCAAAATACCTTGTGGGAATTCAAGAGATACTTGCTCAAATTGCAGCCTATTCATTTGAAAATTTAGAAGAGGTAAATTTTTCAGCTGCTGGTGCTAGAGCAGGAGTAAACAAATCTACTTCAGCTTTCACATCCAAGAGGAGGGTAGCGGCGAATCAAAGTGAAAATTCAAGTTTTGAAGATCATTCGGAATCTCCATCGCAGAAACATGCGGCTGAATCAAACAAGTCTCAACTGTTGACACTCCTTCAGCTGGTGGACGACCGATATAGTCAGTGTTTGGACGAAATTCACACTGTTGTATCTGCATTCCACGCTGCTACAGAGCTGGATCCACACATACACGCGCATTTTGCGCTCCGGACGATCTCTCTCCTATACAAGGACTTAAGGGAGAGGATTAGCAGTCATATTCTTGCCATGGGGTCAAATTTTAACGAGTCGTGCTCGGAAGAGAAAGAATGGCCTTTTGATACTTCATTCATTCAGAAGCAATGGGCTCTGCAGCAGTTGAAAAGAAAAGATCAGTTGTGGAGGCCCCAAAGGGGCTTGCCGGAAAGATCTGTCTCGGTTCTTCGCGCTTGGATGTTTCAGAATTTCCTCCATCCGTATCCTAAAGATGCAGAGAAGCATTTACTAGCAGTGAAAAGTGGGTTGACTAGAAGTCAGGTGTCAAACTGGTTTATAAATGCGCGAGTTCGGCTATGGAAGCCGATGATTGAGGAAATGTATGCAGAAATGAACAGAAGAAAGGCTTGTAGAAATGAAGAAGGAATAGAGAGCAGCCATAGAAGCAGGATATGCTTGAACAATCAAATGTTTAATATGAATTGA 1716 0.4301 MSMDNDLYIAPLNMAGHSSTVIDHEITQKPLLHCYSFDLNNQNHIINGIPMLSGEQCEPISNVHVGSFMNSSSIGDTNSFLTSQQGKNIVGEASNHIGNSEFHEHLAGGTSSTPASLAAILAARIGLQENLENSANFSPSLGPFEALGSYVFNNWQDNSNPLSANFSDRGGYNESGNGKWKVVNKFLKAPEVDGAGFLPYSSIGNIDHDGWTSLSVANLANHAYNSSNYSNELSLSLATSPTAGQCSEMSGSDVSCSMNETRTGLEKASCSSSRELSMNLGSDKHVRFSPSILGSKYLVGIQEILAQIAAYSFENLEEVNFSAAGARAGVNKSTSAFTSKRRVAANQSENSSFEDHSESPSQKHAAESNKSQLLTLLQLVDDRYSQCLDEIHTVVSAFHAATELDPHIHAHFALRTISLLYKDLRERISSHILAMGSNFNESCSEEKEWPFDTSFIQKQWALQQLKRKDQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMNRRKACRNEEGIESSHRSRICLNNQMFNMN* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0979 571 CDD homeodomain 472 533 IPR001356 GO:0003677
Aev07g0979 571 SUPERFAMILY Homeodomain-like 474 541 IPR009057 -
Aev07g0979 571 SMART HOX_1 472 536 IPR001356 GO:0003677
Aev07g0979 571 Pfam Associated with HOX 292 429 IPR006563 -
Aev07g0979 571 PANTHER HOMEOBOX PROTEIN ATH1 16 568 - -
Aev07g0979 571 SMART prehox3 286 430 IPR006563 -
Aev07g0979 571 MobiDBLite consensus disorder prediction 339 355 - -
Aev07g0979 571 Gene3D - 475 554 - -
Aev07g0979 571 MobiDBLite consensus disorder prediction 339 365 - -
Aev07g0979 571 Pfam Homeobox KN domain 489 528 IPR008422 GO:0003677|GO:0006355
Aev07g0979 571 ProSiteProfiles 'Homeobox' domain profile. 469 532 IPR001356 GO:0003677
Aev07g0979 571 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 16 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0979 Aev-Chr7 7179363 7182206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0979 226 545 Homeobox Transcription Factor Family AT4G32980 56.615 1.22e-106 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aev07g0979 POX 1.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0979 - - gmx:100820354 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0979 07 7179363 7182206 Aev07g0979 07 7179363 7182206 ECH