Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0939 ATGGGGGGTCATGATAATGCAATGGGGTTTCAACATGGAAATGAGAGCAATAATATTCTGACAAATGTCTCAGAAATGGCAATTAGTTCTGTGTCCATGTCCAAGCCTTCAGATTCACCTAACCCTTTCCTTGTTGTTGCTCCTTCTTCTTCTTGGGATCCACTTGTTTCCTTGAGCCAGGCTCAAACTTTTGGAGGCTCTTCAATGGTTTCTCATGGTGATTTTGGAAATTCTTCTTCTTACCCTCTTGTCATGGAGAATCAAGGAATGAGCACCACCTCACACCTTGTTCAGTATATGTCTGAATCAAATCTTGATGGCATGGTAGTACCAAAAATTCACTCCTATGGAAGTGGTAACTTCTCTGAAATGGTTGGTCCCTTTGGTCAAATGGGGTCTGGTGATATAGCTAACATGGGGTATAGATCAAGTTTTAATAATCACAGCAAGGATAATGGAGCAGAAAGAGCTTCAATGAATGAACAATCTCAGGTTGATGATTCAATTTCTGAGGAGGGTGTTCCAGGATCTGCACCTAGTGGAAATAGAAGAAAGCGTGTGATTGATCATGATTCTACTTTCAGTGCAAACAAGAATGCTGAGGGTGATGAGATGAAAGATTCACCTAGGAAGAGCTCTGACTGTGGTAAAGAACATGAAAAGAAGGCGAAAGTTGAGCAGAATACATGTGCGGATTTGCGCGGTAAGCAACCGGTGAAGCAACCGAAAGACAATTCTCAAAGTGGAGAGGCCCCCAAAGAAAATTTCATTCATGTGAGAGCTAGGAGAGGTCAAGCTACAAACAGTCACAGCCTTGCAGAAAGGGTTAGAAGAGAAAAGATTAGTGAGAGAATGAGATTGCTTCAAGAACTTGTTCCGGGATGCAACAAGATAACTGGCAAAGCAGTAATGCTAGATGAGATTATAAACTATGTGCAATCTCTGCAACAACAGGTTGAGTTTTTGTCCATGAAACTTGCCACAGTGAACCCCGAAATGAATTTCGATGTAGAGCGGATCCTATCCAAGGATATCCTCCAGTCAAGGTTAGGACATGGAATTGGCGGATATGGTCATAGTATCGGCTCCTCTCACCCATTCCCCAACGCAAGTTTCCACGGAACAATGCCTGGAATGCCGAGTACATCAGCACAATTCCCTCCTCTGCCCCAGGCTGTTTTGGACCATGAGTTCCAAAGCCTCTATGGAATGGGGTATGATTCTAATACATCACTCGACAATTTGGGACCAAATGGGCGATTGAAAAGTGAGTTATAG 1278 0.4311 MGGHDNAMGFQHGNESNNILTNVSEMAISSVSMSKPSDSPNPFLVVAPSSSWDPLVSLSQAQTFGGSSMVSHGDFGNSSSYPLVMENQGMSTTSHLVQYMSESNLDGMVVPKIHSYGSGNFSEMVGPFGQMGSGDIANMGYRSSFNNHSKDNGAERASMNEQSQVDDSISEEGVPGSAPSGNRRKRVIDHDSTFSANKNAEGDEMKDSPRKSSDCGKEHEKKAKVEQNTCADLRGKQPVKQPKDNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEMNFDVERILSKDILQSRLGHGIGGYGHSIGSSHPFPNASFHGTMPGMPSTSAQFPPLPQAVLDHEFQSLYGMGYDSNTSLDNLGPNGRLKSEL* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0939 425 MobiDBLite consensus disorder prediction 142 170 - -
Aev07g0939 425 Pfam Helix-loop-helix DNA-binding domain 268 316 IPR011598 GO:0046983
Aev07g0939 425 CDD bHLH_AtBPE_like 255 340 - -
Aev07g0939 425 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 263 334 IPR036638 GO:0046983
Aev07g0939 425 Gene3D - 262 336 IPR036638 GO:0046983
Aev07g0939 425 MobiDBLite consensus disorder prediction 142 253 - -
Aev07g0939 425 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 16 425 IPR024097 GO:0006355
Aev07g0939 425 SMART finulus 271 321 IPR011598 GO:0046983
Aev07g0939 425 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 265 315 IPR011598 GO:0046983
Aev07g0939 425 MobiDBLite consensus disorder prediction 183 229 - -
Aev07g0939 425 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 16 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0939 Aev-Chr7 6739994 6742447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0939 1 425 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 43.649 5.35e-90 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev07g0939 HLH 4.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0939 - - gmx:100801930 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0939 07 6739994 6742447 Aev07g0939 07 6739994 6742447 ECH