Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0929 ATGTTGGTGGATACAACAAAAGGGTGTGCAAAAATGCCAATATTTCAGCCATCTAAAGATTCTATTCTCAATGTATTGAATCTAGATACTACCATGAAAAAAGGTAGTGTTTTGGATCTGAAGTTGATGATTGAAGAATTGGAGTCAAAGATTATTGATGATATTCCTTCAGTTTTCATTTGTCCAATCTCACTTGAGCCTATGCAGGATCCAGTGACCCTTTGCACAGGTCAAACATATGATAGATCCAACATCCTCAAATGGTTCTCACTTGGACACAACACATGCCCAACAACAATGCAAGAGCTTTGGGATGGAAATAGTGTCACACCAAACAGGACCTTAAGCCAATTGATCCTAACTTGGTTCACTCACAAGTACTTGGAAATGAAGAAGAGGCTTGAGGATGTTCAAGGTAGAGCCTTGGAACTATTGGAAACCCTAAAAAAGGTAAAGGGTCAAAATAGGGTCAAAGCTCTGAAGAATCTTCACAAAATTGTTTCTTCTCATGTTCCTGCAAGGAAAGAAGTTGAGAAAAATGGTGGGGTTGCTCTGATTTTCTCTCTTTTAGGACCTTTCACTTCACATGCTGTTGGGTCAGAAGCAATTGGGATAATAGTGAATTTGGATTTGAGCAATTCAGAGTTGAAGAAGAATTTGATGCATCCTTCAAAAGTTTCACTAATTGTTGATATCATGAATGAGGGAACAATTGAGACCAAGATGAATTGTGCGAAGTTAATTGAGATTTTGTTGATGGAATTGGAAGATAATAAAGGGGATGAAATTGTTTCAAGCTTGAGTCTTTTGGTGGGGTTATTGAGGCTAGTTAGGGATAAAAAACACAAAAAAGGGGTATTAATTGGTTTGATGTTACTAAAGTCTTTATGTTCATATGAGTCAGCTAGAATCTCATTGGTAAGTATTGGAGCAATTCCTCAATTGATTGAATTGTTGCCAAATTTGAACAATGAGTGCTTGGAAATAGCACTATTTATTCTTGAGGTTTTGTCAACACTTGAAGAGGGGAAATTGGCATTGAAAAATTGTCCAAACATTGTTCCAAATGTGGTGAAATTGCTGATGAGGGTTTCTGAGAATTGCACACAATTTGCACTGAAAATTTTGTTGGCTATTTACAAGCTTGCCCCTGAGGAATGTGCATCAGAAGCAGTGGAAGCTGGTTTGGCACCAAAATTGTTGCTTGTGATTCAGAGTGGATGCAACCCTGTTTTGAAGCAAATGTCTTCTGAGTTCTTGAAAATTTGCAGCTTGAATTACTCTGCTAATCTCTTGATTTCTAAGTGTATGCTTACCACAACAATACAATGA 1332 0.3739 MLVDTTKGCAKMPIFQPSKDSILNVLNLDTTMKKGSVLDLKLMIEELESKIIDDIPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHNTCPTTMQELWDGNSVTPNRTLSQLILTWFTHKYLEMKKRLEDVQGRALELLETLKKVKGQNRVKALKNLHKIVSSHVPARKEVEKNGGVALIFSLLGPFTSHAVGSEAIGIIVNLDLSNSELKKNLMHPSKVSLIVDIMNEGTIETKMNCAKLIEILLMELEDNKGDEIVSSLSLLVGLLRLVRDKKHKKGVLIGLMLLKSLCSYESARISLVSIGAIPQLIELLPNLNNECLEIALFILEVLSTLEEGKLALKNCPNIVPNVVKLLMRVSENCTQFALKILLAIYKLAPEECASEAVEAGLAPKLLLVIQSGCNPVLKQMSSEFLKICSLNYSANLLISKCMLTTTIQ* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0929 443 Gene3D - 134 430 IPR011989 -
Aev07g0929 443 Pfam U-box domain 55 126 IPR003613 GO:0004842|GO:0016567
Aev07g0929 443 SMART Ubox_2 58 122 IPR003613 GO:0004842|GO:0016567
Aev07g0929 443 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 39 133 IPR013083 -
Aev07g0929 443 ProSiteProfiles U-box domain profile. 54 129 IPR003613 GO:0004842|GO:0016567
Aev07g0929 443 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 30 28 442 - -
Aev07g0929 443 CDD RING-Ubox_PUB 59 101 IPR045210 -
Aev07g0929 443 PANTHER WDSAM1 PROTEIN 28 442 IPR045185 GO:0061630
Aev07g0929 443 SUPERFAMILY RING/U-box 48 124 - -
Aev07g0929 443 SUPERFAMILY ARM repeat 135 427 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0929 Aev-Chr7 6624258 6625705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0929 12 443 U-box Gene Family AT3G49810 59.081 3.80e-180 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0929 - - gmx:100803878 594.349