Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0708 ATGGATGATGCTGGGCATCGTGAAAATGGAAGACACAAAGCAGATCAATATAAATCTGCTCAGGGACAGTGGTTGATGCAACATCAGCCTTCCATGAAGCAAATTATGGCTATTATGGCTGAAAGAGATGCAGCTATTCAAGAAAGAAACCTGGCCCTTTCTGAGAAAAAGGCAGCACTTGCAGAGCGTGACATGGCATTCCTGCAGCGAGATGCTGCAATTGCTGAACGAAACAATGCATTAATGGAACGGGATAATGCAATTGCAACACTTCAATTTCGAGAAAATGCCATATCCAATGGTAGTATGTCCTCATGCCCTCCAGGATGCCAAATCTCACGTGGCATCAAGCATATGCATCATCCACAGCAACAGGTGCATCATTTGCCTAATATGGGTGATGCTTCTTACAACACCCGAGAAATGCACACTAGTGATTCCATCCCAGCAGTGCCTATTCCTTCAGAGCCTGGGAAGTCACGTCGAGCCAAGCGACCAAAGGAACCCAAGTCAGTTTCACCCAATAAGAAGACTTCAAAATCTACTAGGAAGGTGAAGAAGGATACCGAAGACTCGAGTAAGATGATGTTTGGCAAGTCGAATGAGTGGAAGAGCAATCAGGAAATCATTAATGGGGGAGATGATCTTAACAAGCAGTTAATGGTGTCCAAGTCTGATTGGAAAGGCCAAGACTTGGCATTGAACCAAGTTGCGTACGATGAGTCAACAATGCCTGCACCAGGCTGCTCTTGTACTGGCGTTGTGAGGCAGTGCTACAAATGGGGTAATGGGGGATGGCAGTCTGCTTGTTGCACAACCACCCTTTCAGTGTATCCACTTCCGGCAGTGCCAAACAAGAGGCATGCTCGGATAGGTGGTCGAAAAATGAGCGGAAGTGCTTTCAATAAGTTGCTTAGCCGGCTCGCAGCAGAAGGGCATGATCTGTCAAACCCGGTTGACCTCAAGGACCATTGGGCCAAACATGGTACAAATCGGTACATCACAATAAAGTAG 1014 0.4665 MDDAGHRENGRHKADQYKSAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLALSEKKAALAERDMAFLQRDAAIAERNNALMERDNAIATLQFRENAISNGSMSSCPPGCQISRGIKHMHHPQQQVHHLPNMGDASYNTREMHTSDSIPAVPIPSEPGKSRRAKRPKEPKSVSPNKKTSKSTRKVKKDTEDSSKMMFGKSNEWKSNQEIINGGDDLNKQLMVSKSDWKGQDLALNQVAYDESTMPAPGCSCTGVVRQCYKWGNGGWQSACCTTTLSVYPLPAVPNKRHARIGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0708 337 PANTHER - 1 337 IPR010409 -
Aev07g0708 337 SMART GAGA_bind_2 1 337 IPR010409 -
Aev07g0708 337 MobiDBLite consensus disorder prediction 158 174 - -
Aev07g0708 337 MobiDBLite consensus disorder prediction 1 15 - -
Aev07g0708 337 Coils Coil 51 85 - -
Aev07g0708 337 Pfam GAGA binding protein-like family 1 337 IPR010409 -
Aev07g0708 337 MobiDBLite consensus disorder prediction 1 21 - -
Aev07g0708 337 MobiDBLite consensus disorder prediction 119 210 - -
Aev07g0708 337 PANTHER PROTEIN BASIC PENTACYSTEINE6 1 337 - -
Aev07g0708 337 MobiDBLite consensus disorder prediction 183 197 - -
Aev07g0708 337 MobiDBLite consensus disorder prediction 129 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0708 Aev-Chr7 4597837 4598960 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0708 65 337 BBR or BPC Transcription factor family AT5G42520 61.592 2.05e-115 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Aev07g0708 GAGA_bind 3.2e-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0708 - - gmx:100783502 619.387