Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0663 ATGGCCAGAGTTATGGTTGTTTTGGTTAGCCTCCTAATTGGATTATGTGGTTTCACAATCAACACTTATGCTTTCTCACCTTCTGGATGGATCAATGCCCATGCCACATTTTATGGGGGTAGTGATGCCTCAGGAACTATGGGAGGAGCTTGTGGGTATGGGAATCTGTATTCAACAGGATATGGGACTAGAACTGCAGCTTTGAGCACTGCCTTATTCAATGATGGAGCTTCATGTGGAGAGTGCTACAAAATCATTTGTGATTACAAAACAGACCCAAGATGGTGCATTAAAGGAACATCTGTGACCATAACTGCCACAAACTTTTGCCCTCCTAATTTTGCTCTTCCAAATAACAATGGAGGTTGGTGCAACCCTCCTCTGAAGCACTTTGATATGGCTCAACCAGCATGGGAAAAGATTGGTATCTACAGAGGAGGGATTGTTCCTGTGTTGTTCCAAAGGGTGCCATGCAAAAAGCATGGAGGGGTTAGGTTCACAATAAATGGGAGAGACTACTTTGAGCTAGTGTTGATAAGCAATGTGGGAGGTGCAGGATCCATCCAATCAGTGTCCATCAAAGGCTCAAAAACAGGGTGGATGGCCATGTCAAGGAATTGGGGTGCTAATTGGCAATCCAATTCTTATTTGAATGGCCAATCTCTGTCATTCAGGGTCACAACCACTGATGGAGAAACCAGAGTTTTCCAAGACATTGTTCCAGCAAATTGGGGATTTGGTCAAACTTTCTCTAGCCCTGTCCAATTCTAA 771 0.4397 MARVMVVLVSLLIGLCGFTINTYAFSPSGWINAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGECYKIICDYKTDPRWCIKGTSVTITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFTINGRDYFELVLISNVGGAGSIQSVSIKGSKTGWMAMSRNWGANWQSNSYLNGQSLSFRVTTTDGETRVFQDIVPANWGFGQTFSSPVQF* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0663 256 Pfam Lytic transglycolase 65 152 IPR009009 -
Aev07g0663 256 Gene3D - 17 159 IPR036908 -
Aev07g0663 256 PANTHER EXPANSIN 10 256 - -
Aev07g0663 256 Pfam Expansin C-terminal domain 164 241 IPR007117 -
Aev07g0663 256 PRINTS Expansin/Lol pI family signature 238 252 IPR007118 GO:0005576
Aev07g0663 256 PRINTS Expansin/Lol pI family signature 29 44 IPR007118 GO:0005576
Aev07g0663 256 PRINTS Expansin/Lol pI family signature 47 65 IPR007118 GO:0005576
Aev07g0663 256 PRINTS Expansin/Lol pI family signature 69 87 IPR007118 GO:0005576
Aev07g0663 256 PRINTS Expansin/Lol pI family signature 146 162 IPR007118 GO:0005576
Aev07g0663 256 PRINTS Expansin/Lol pI family signature 200 214 IPR007118 GO:0005576
Aev07g0663 256 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 173 252 IPR007117 -
Aev07g0663 256 SUPERFAMILY Barwin-like endoglucanases 29 181 IPR036908 -
Aev07g0663 256 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 48 163 IPR007112 -
Aev07g0663 256 PRINTS Expansin signature 174 195 IPR002963 GO:0009664
Aev07g0663 256 PRINTS Expansin signature 121 138 IPR002963 GO:0009664
Aev07g0663 256 PRINTS Expansin signature 60 74 IPR002963 GO:0009664
Aev07g0663 256 PRINTS Expansin signature 102 112 IPR002963 GO:0009664
Aev07g0663 256 PRINTS Expansin signature 238 254 IPR002963 GO:0009664
Aev07g0663 256 PRINTS Expansin signature 89 100 IPR002963 GO:0009664
Aev07g0663 256 PRINTS Expansin signature 209 230 IPR002963 GO:0009664
Aev07g0663 256 PRINTS Expansin signature 138 151 IPR002963 GO:0009664
Aev07g0663 256 PRINTS Expansin signature 162 174 IPR002963 GO:0009664
Aev07g0663 256 Gene3D - 163 256 IPR036749 -
Aev07g0663 256 SMART dpbb_1 65 153 IPR007112 -
Aev07g0663 256 SUPERFAMILY PHL pollen allergen 160 252 IPR036749 -
Aev07g0663 256 PANTHER EXPANSIN-A15 10 256 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0663 Aev-Chr7 4186765 4188656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0663 65 256 Expansin Gene Family AT1G20190 82.812 2.64e-121 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0663 - - gmx:548040 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0663 07 4186765 4188656 Aev08g0177 08 1002188 1003173 PCT