Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0649 ATGATGGTGGGGTCGGGGTCATCGAGGCGGAGCGAGGTGAGTTTGAGAGTGGATAGTGCGGTGGCGACTCGCTCAGGCGAGTGGGTGCGGGAGGAGGCTGTTGCGGCGGAGGGTGCGGTGGAGGTGGTGGTGGTGGTGGAGGGGGTGGAGGAGGATGAAATAATGGATAAAGAAAGAAAGAGAGAAAGAGAGAAAGAAAGAAGGAAAGAAAGAGAAAGAAGAGGAAGAAAGAGAGAGGGTGGTGGTGGAAGTGCACACTGCACACTGCTGCAGCAGGAGTTAGTTACGAAGAAGAGCGGGATCCTTTTTGCATATGAAGGTACTGAGTTGGGCACTGTTGAGCTTAGATCCGTAAGCAACACAAAGATGTCTTTCATTGGCACCCAACAAAAATGCAAGGCTTGTGACAAAACTGTTTACCCTGTTGATCAGCTTTCTGCTGATGGTGTTGCTTACCACAAAGCTTGTTTCAGGTGCTCTCACTGCAAAGGAACATTAAAGCTGAGCAACTATTCCTCAATGGAAGGTGTTCTTTACTGTAAGCCTCACTATGAGCAGCTCTTCAAGGAGACAGGAACTTTCAAGAAGAACTTCCAGTCACCTGCAAAGCTAGCTGACAAGACCACACCTGAGCTGACAAGGTCCCCAAGTAAAGCTGCTAGCATGTTTTCTGGGACACAAGAAAAGTGTGCTACATGTGGCAAAACAGCTTATCCATTGGAGAAGGTAACAGTGGAAAGTCAAGCTTATCATAAATCATGTTTCAAGTGTTCACATGGTGGCTGTCCCATAACGCCATCAAATTATGCCGCCCTGGAGGGCGTCTTGTACTGCAAGCACCATTTCTCGCAGCTTTTTAAGGAGAAAGGAAGCTACAACCATCTTATTAAGTCTGCATCAATGAAAAGGGCGGCAGCCGCAGCGCCCTCCGTTCCAGAATCATGA 945 0.4847 MMVGSGSSRRSEVSLRVDSAVATRSGEWVREEAVAAEGAVEVVVVVEGVEEDEIMDKERKREREKERRKERERRGRKREGGGGSAHCTLLQQELVTKKSGILFAYEGTELGTVELRSVSNTKMSFIGTQQKCKACDKTVYPVDQLSADGVAYHKACFRCSHCKGTLKLSNYSSMEGVLYCKPHYEQLFKETGTFKKNFQSPAKLADKTTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGVLYCKHHFSQLFKEKGSYNHLIKSASMKRAAAAAPSVPES* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0649 314 Pfam LIM domain 132 187 IPR001781 -
Aev07g0649 314 Pfam LIM domain 230 285 IPR001781 -
Aev07g0649 314 ProSiteProfiles LIM domain profile. 130 190 IPR001781 -
Aev07g0649 314 MobiDBLite consensus disorder prediction 54 81 - -
Aev07g0649 314 Gene3D Cysteine Rich Protein 224 294 - -
Aev07g0649 314 Gene3D Cysteine Rich Protein 126 196 - -
Aev07g0649 314 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 256 295 - -
Aev07g0649 314 PANTHER OS06G0237300 PROTEIN 123 309 IPR045268 GO:0051015
Aev07g0649 314 CDD LIM1_SF3 128 190 - -
Aev07g0649 314 ProSiteProfiles LIM domain profile. 228 288 IPR001781 -
Aev07g0649 314 PANTHER LIM DOMAIN-CONTAINING PROTEIN WLIM2B 123 309 - -
Aev07g0649 314 MobiDBLite consensus disorder prediction 54 84 - -
Aev07g0649 314 ProSitePatterns LIM zinc-binding domain signature. 132 166 IPR001781 -
Aev07g0649 314 MobiDBLite consensus disorder prediction 1 24 - -
Aev07g0649 314 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 158 198 - -
Aev07g0649 314 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 124 157 - -
Aev07g0649 314 CDD LIM2_SF3 230 290 - -
Aev07g0649 314 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 222 255 - -
Aev07g0649 314 Coils Coil 54 74 - -
Aev07g0649 314 SMART lim_4 229 281 IPR001781 -
Aev07g0649 314 SMART lim_4 131 183 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0649 Aev-Chr7 4072547 4076266 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LIM Aev07g0649 LIM 3.1e-10 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0649 K09377 - gmx:100809121 373.244