Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0644 ATGATTTTTCCAAGATTCTCTTCGATTCTAAAAGGTATGGAATTGGAAACTTTGCTCTATGCTCCTTGTTTCATGTCAAATTCAAATTGGTTAGTCCAAGAGAGCCAATTCGGCACAGAATGGACTAAAGAAGAGAATAAGAAGTTTGAGAGTGCCCTTGCTATATATGATAAGGACACCCCTGACAGATGGTTGAAGGTTGCTGCAATGATCCCTGGGAAGACTGTGTTTGATGTGATCAAGCAGTACAGAGAATTGGAAGAAGATGTGACTGAGATCGAAACCGGCCGGGTTCCGGTTCCCGATTATGTCGCCTCTTCTTTCACCTTTGAACTTGTTCACAGCCAGAACTATGATGGATGCAGGAGGAGGCATGCCAGTGTCAGGGGCTCTGATCAGGAGAGGAAGAAAGGGGTGCCTTGGACTGAAGAGGAACATAGACGTTTTCTGATGGGGCTTCTGAAGTATGGAAAAGGTGATTGGAGAAACATATCTCGAAATTTCGTTGTCACAAAGACTCCAACACAAGTAGCAAGCCATGCTCAGAAGTACTACATAAGGCAAAAAGTTTCTGGAGGGAAAGATAAGAGGAGGCCAAGCATTCATGACATAACAACCGTTAACCTGGCGGAAACCGCCACATTGGATAAGATCAACAAGCCTATTTTGTTCGATCAGTCTCACGTGCTCGCGCCGCCGTCGCCGCAGCAGCAGAAGCTAAGTACTAGCATTTCAAAAGTACAATTGGATTGGATCAATCACTACAATGATGGATCACCAGTCATGGTTTTCAACCCAAATTGTGATGATTTGTTGATGATGCAATCTTCATCTGATATGGCTTCCAAGGTCCTAAAACAGCAGGGGCAAGACCTCTATGATTGTGCTTTATTCCATGAAGCTTATGCAAAGTTTAAGATCCCTGGTTTTAGGAAAGGTTCTAGGGACTTCAACAATGAAGCTGTTTTTGGTATTCATGCATTGTGA 987 0.4357 MIFPRFSSILKGMELETLLYAPCFMSNSNWLVQESQFGTEWTKEENKKFESALAIYDKDTPDRWLKVAAMIPGKTVFDVIKQYRELEEDVTEIETGRVPVPDYVASSFTFELVHSQNYDGCRRRHASVRGSDQERKKGVPWTEEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQKVSGGKDKRRPSIHDITTVNLAETATLDKINKPILFDQSHVLAPPSPQQQKLSTSISKVQLDWINHYNDGSPVMVFNPNCDDLLMMQSSSDMASKVLKQQGQDLYDCALFHEAYAKFKIPGFRKGSRDFNNEAVFGIHAL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0644 328 Gene3D - 139 190 - -
Aev07g0644 328 SMART sant 137 187 IPR001005 -
Aev07g0644 328 SMART sant 37 89 IPR001005 -
Aev07g0644 328 ProSiteProfiles Myb-like domain profile. 133 185 IPR001005 -
Aev07g0644 328 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 16 306 IPR043363 -
Aev07g0644 328 CDD SANT 140 184 IPR001005 -
Aev07g0644 328 SUPERFAMILY Homeodomain-like 39 93 IPR009057 -
Aev07g0644 328 CDD SANT 40 86 IPR001005 -
Aev07g0644 328 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 16 306 - -
Aev07g0644 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 189 IPR017930 -
Aev07g0644 328 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 136 188 IPR006447 GO:0003677
Aev07g0644 328 ProSiteProfiles SANT domain profile. 36 91 IPR017884 -
Aev07g0644 328 Gene3D - 33 100 - -
Aev07g0644 328 ProSiteProfiles SANT domain profile. 141 189 IPR017884 -
Aev07g0644 328 SUPERFAMILY Homeodomain-like 135 189 IPR009057 -
Aev07g0644 328 Pfam Myb-like DNA-binding domain 40 85 IPR001005 -
Aev07g0644 328 Pfam Myb-like DNA-binding domain 140 184 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0644 Aev-Chr7 4044904 4046562 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev07g0644 Myb_DNA-binding 1.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0644 - - ccaj:109813886 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1800 02 19774643 19776432 Aev07g0644 07 4044904 4046562 ECH
Aev07g2079 07 21919177 21929724 Aev07g0644 07 4044904 4046562 ECH
Aev07g0644 07 4044904 4046562 Aev07g0644 07 4044904 4046562 ECH
Aev03g0850 03 6827923 6828685 Aev07g0644 07 4044904 4046562 PCT