Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0626 ATGGCGTCCACCTTCAGGGACCGCACCTCGGAGTTCCGGTCGCTGTCGGAGACTCTAAAGAAGATCGGAAAATCCACGCCGGCGGCGACGCCCAACCAACCGGAAAATTCTCCGTCAACATCTCATGCGTCTCATTCCAGATCCGAGTTCAACAGAAAAGCCTCGCGGATCGGGTTGGGCATCCACGAAACCTCGCAGAAAATCGCCAGGCTCGCTCAACTGGCGAAGAAATCGTCGATGTTCAACGACCCGATTGTGGAGATTCAGGAATTGACGGTTGTGATTAAGAATGACATCACGGCGTTGAACTCAGCTTTGTCTGATTTGCAGACAATTCAGAACATGGAGATAGCTGATGGGACATACTCGGAGGACAGAATTGTGCACTCGAATGCTGTTTGTGATGACTTGAAGAACAGGCTCATGGGTGCCACCAAGAAACTCCAAGATGTCTTGACTACTAGGACAGAGAATATCAAGGCTCATGAGAATAGGAAGCAGATATTTTCGAAGAATGCAGCTAGAGAGAACCCTTTTCAGCATCGCCCTAATCCACCAAATGAGCCACCCCCATGGTCAAATTCTTTAAATGAATCTGAAGGCCAGCAACTAACATCAGCACTCTTACCAAATGGAGCTCCAGCTGGCAATCAACTAAGACGAAGGTTAGCTGTGGACAACACTCCAACCCCACAAATGGAAATGTCTATGGTACAGCAGGTTGTTCCTCGTCAGGAAAATTATGCTCAAAGTCGGGCAAATGCTCTGCATAATGTGGAATCTACGATCACAGAACTTAGTGGGATCTTCTCACATTTGGCTACAATGGTTGCCCATCAAGGGGAACTAGCAATCAGGATTGATGACAACATGGATGAGTCATTGGCAAATGTTGAAGGAGCTCACAGTTCTTTATTGAGGCATCTCAACCAAATATCATCAAATAGGTGGCTTCTAATCAAGATATTTGCCATATTGATAGTTTTCCTAATGATCTTCCTAATCTTCGTGGCTTAA 1017 0.4631 MASTFRDRTSEFRSLSETLKKIGKSTPAATPNQPENSPSTSHASHSRSEFNRKASRIGLGIHETSQKIARLAQLAKKSSMFNDPIVEIQELTVVIKNDITALNSALSDLQTIQNMEIADGTYSEDRIVHSNAVCDDLKNRLMGATKKLQDVLTTRTENIKAHENRKQIFSKNAARENPFQHRPNPPNEPPPWSNSLNESEGQQLTSALLPNGAPAGNQLRRRLAVDNTPTPQMEMSMVQQVVPRQENYAQSRANALHNVESTITELSGIFSHLATMVAHQGELAIRIDDNMDESLANVEGAHSSLLRHLNQISSNRWLLIKIFAILIVFLMIFLIFVA* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0626 338 SMART tSNARE_6 241 308 IPR000727 -
Aev07g0626 338 SUPERFAMILY t-snare proteins 46 301 IPR010989 GO:0016020|GO:0016192
Aev07g0626 338 PANTHER SYNTAXIN 4 337 IPR045242 -
Aev07g0626 338 MobiDBLite consensus disorder prediction 158 215 - -
Aev07g0626 338 MobiDBLite consensus disorder prediction 19 45 - -
Aev07g0626 338 PANTHER SYNTAXIN-31 4 337 - -
Aev07g0626 338 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 246 308 IPR000727 -
Aev07g0626 338 MobiDBLite consensus disorder prediction 1 51 - -
Aev07g0626 338 CDD SNARE_syntaxin5 249 333 - -
Aev07g0626 338 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 4 21 IPR021538 -
Aev07g0626 338 Gene3D - 42 301 - -
Aev07g0626 338 Pfam SNARE domain 283 334 IPR000727 -
Aev07g0626 338 ProSitePatterns Syntaxin / epimorphin family signature. 252 291 IPR006012 GO:0005484|GO:0006886|GO:0016020
Aev07g0626 338 MobiDBLite consensus disorder prediction 193 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0626 Aev-Chr7 3911845 3914232 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0626 1 338 SNARE and Associated Proteins AT5G05760 65.689 1.55e-153 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0626 K08490 - gmx:100777383 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0626 07 3911845 3914232 Aev07g0626 07 3911845 3914232 ECH