Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0598 ATGTGCAGTGGTTCAAAAAGTAGACTTTCTTCCTCAAACCAAGTCATGGAAACTGGGTTTCAGAAGCAGAACCAGGATGGTGTCCAAAACTTGTCAGTTTTGCTTGAGTTTTCTGCATCCGATGATTTCGAAGCTTTCAAAAGAGAAGTGGAAGAGAAGGGTTTGGATGTGAACGAGGCGGGCTTTTGGTATGGCAGAAGAATCGGATCAAAGAAGATGGGATCCGAAAAGAGGACCCCTCTCATGATTGCTTCCTTGTATGGAAGCTCAAGGGTGCTGAAGTATATTATTGAGGCTGGCAAGGTTGATGTGAACAAGGCCTGTGGTTCTGATAGGGCCACTGCTCTCCATTGCGCTGTCGCCGGAGGCTCCGAATCCTCACTTGAGATTGTCAAGCTCTTGCTTGATGCTCAGGCTGATGCTGACTGTGTCGATGCTAGTGGAAACAAACCTGTTAATCTGATTGCTCCTGCCTTTAATTCGTCTTCAGGTTCTCGGAGGAAGGCCATGGAGTTGTTTCTCAGGGGTGGGGAAGATCAGCTTTTGCTCCAGGAGATGGAGCAGCAGTTTTTCTCTTCAAAAGAAGGAGCGGAGAAAAAAGAAAAAGATGGAGCTGATAAGAAGGAATATCCTGTTGACATATCGTTGCCTGACATAAACAACGGTGTATACGGATCGGACGAGTTTAGGATGTACAGCTTCAAGGTGAAGCCTTGCTCAAGGGCTTACTCCCACGATTGGACCGAGTGTCCATTTGTTCATCCAGGGGAGAACGCAAGGAGGAGAGACCCACGCAAGTATCCCTACAGCTGCGTTCCCTGCCCTGAATTCCGCAAAGGGACCTGCCAAAAGGGTGATTCCTGTGAATACGCACATGGTGTTTTTGAGTCCTGGCTTCATCCTGCTCAATACCGAACCAGGCTTTGCAAGGATGAGACTGGCTGCACCAGGAAAGTCTGCTTCTTTGCTCACAAACCCGAGGAGCTACGCCCCGTGTACGCCGCCACTGGCTCTGCTATGCCTTCACCAAAATCATATTCTGCTAGTGGACTCGACATGTCAGTGATGAGTCCTCTGTCTCTCAGTTCCACATCTTTGCCTATGCCAACTGTTTCGACTCCACCAATGTCTCCCTTGGCAGCAGCTTCATCTCCCAAGAGTGGAAACTTGTGGCAGAACAAAATCAACCTCACCCCACCATCATTGCAGCTCCCTGGTAGCCGGCTGAAGACCGCCTTGAGTGCCAGGGATCTGGATTTGGAGATGGAACTGCTTGGTCTCGACAGTCCCGCTCGTCAGCAGCATCAGCAGCATCAGCAGCAGCAGCAACTGATTGAAGAGATTGCAAGGATCTCTTCCCCATCTTTCAGGAACAGCAGGATTGGTGATTTGAATCCTACTAACCTTGATGACCTGTTAGCAGCTGCTGATCCTTCTCTCTTATCACAGCTACACAGCCTCTCTTCTCAGCCTTCGACTCCTACACAGTTGCAGTCTCCAAGTGGGCTTCAGATGCGCCAAAACATGAACCATCTCCGGGCGAGTTATCCATCCAATGTCTCGTCCTCTCCGGTTAGGAAACCCTCGGCTTTTGGGTTCGACTCATCTGCTGCTGTGGCAGCTGCAGTGATGAATTCCAGGTCTAACGCCTTTGCGAAGCGAAGCCAGAGCTTCATCGATCGTGGAGCGGCGAACCACCACAACCTCGGGCTGTCTTCGCCTTCCAACCCCACATGCAGGGTGTCCTCTGGCCTCTCAGATTGGAATTCCCCCACAGGGAAACTTGATTGGGGTGTGAATGGAGATGAACTGAACAAGCTTAGGAAATCTGCTTCATTCGGGTTCAGAAATAATGGGTCAGCAACCTCCAACCCAATGGCACATTCAGAACATGTTGAGCCAGATGTTTCATGGGTTCATTCATTGGTTCCCTCTGAAAGTTCTGAGATATTTGGTGCTGAGAAGAAGCAGCAATTTGATCTCAGCAAAGAGATGCTTCCACCATGGGTGGTGGAGCAGATGTACATAGAGCAGGAGCAGATGGTAGCATAA 2052 0.4976 MCSGSKSRLSSSNQVMETGFQKQNQDGVQNLSVLLEFSASDDFEAFKREVEEKGLDVNEAGFWYGRRIGSKKMGSEKRTPLMIASLYGSSRVLKYIIEAGKVDVNKACGSDRATALHCAVAGGSESSLEIVKLLLDAQADADCVDASGNKPVNLIAPAFNSSSGSRRKAMELFLRGGEDQLLLQEMEQQFFSSKEGAEKKEKDGADKKEYPVDISLPDINNGVYGSDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGTCQKGDSCEYAHGVFESWLHPAQYRTRLCKDETGCTRKVCFFAHKPEELRPVYAATGSAMPSPKSYSASGLDMSVMSPLSLSSTSLPMPTVSTPPMSPLAAASSPKSGNLWQNKINLTPPSLQLPGSRLKTALSARDLDLEMELLGLDSPARQQHQQHQQQQQLIEEIARISSPSFRNSRIGDLNPTNLDDLLAAADPSLLSQLHSLSSQPSTPTQLQSPSGLQMRQNMNHLRASYPSNVSSSPVRKPSAFGFDSSAAVAAAVMNSRSNAFAKRSQSFIDRGAANHHNLGLSSPSNPTCRVSSGLSDWNSPTGKLDWGVNGDELNKLRKSASFGFRNNGSATSNPMAHSEHVEPDVSWVHSLVPSESSEIFGAEKKQQFDLSKEMLPPWVVEQMYIEQEQMVA* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0598 683 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29 19 682 - -
Aev07g0598 683 ProSiteProfiles Ankyrin repeat profile. 111 146 IPR002110 GO:0005515
Aev07g0598 683 Gene3D - 270 331 - -
Aev07g0598 683 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 273 293 IPR000571 GO:0046872
Aev07g0598 683 PANTHER UNKEMPT FAMILY MEMBER 19 682 IPR045234 -
Aev07g0598 683 MobiDBLite consensus disorder prediction 366 385 - -
Aev07g0598 683 Gene3D - 5 197 IPR036770 -
Aev07g0598 683 SMART ANK_2a 111 143 IPR002110 GO:0005515
Aev07g0598 683 SMART ANK_2a 76 106 IPR002110 GO:0005515
Aev07g0598 683 ProSiteProfiles Zinc finger C3H1-type profile. 268 295 IPR000571 GO:0046872
Aev07g0598 683 Pfam Ankyrin repeats (3 copies) 72 142 IPR002110 GO:0005515
Aev07g0598 683 ProSiteProfiles Ankyrin repeat region circular profile. 111 145 - -
Aev07g0598 683 SUPERFAMILY Ankyrin repeat 29 154 IPR036770 -
Aev07g0598 683 SMART c3hfinal6 268 294 IPR000571 GO:0046872
Aev07g0598 683 SMART c3hfinal6 303 326 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0598 Aev-Chr7 3712700 3714751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0598 29 648 C2H2 Transcription Factor Family AT5G12850 40.508 1.64e-141 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev07g0598 Ank_2 4.4e-08 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0598 - - gmx:100783376 967.222