Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0588 ATGATGAAATCCAACGGCGGAGATCGGATCAAGGGGTCCTGGAGCCCGGAGGAGGACGCGACGCTGCTCAAGCTGGTGGCGCAGCACGGTGCCAGGAACTGGTCGGCAATAAGCAGCGGCATACCTGGGAGATCGGGCAAGTCATGCCGGCTGCGGTGGTGCAACCAGCTCAGCCCCGAAGTGCAGCACCGCCCCTTCACTCCGGCGGAGGACAGCATCATCCTCATGGCGCACAAAAGGCATGGTAACAAGTGGGCTACCATATCACGCCTCCTCCCGGGGCGCACCGACAACGCAATTAAGAACCACTGGAACTCCACCCTCCGCCGCCGCCGCAACGCCACCGCCGCCACAGGAGGGGGTCTCTCCGGCGCCACCTCGTCGTCGTCTGATTTTACCCCAGTTCCGGACAGTAGGAAACGCCAGGGTGACGCAGTCACCATCGCCGGCGATGATCTGTTTGAGTCGTCAGAAAACTACAAGCGACAACGCTTGGAGGCGGTTACGGTTAACGTTAAGGGGGAGAATAACGGTTACAGAGACGGTTATAGAGATCAGATTGAGGAGGAGGAGGAAAGGGTGGCGGTTACGACGTTGAGCTTATTACCGCCGGGGGAGAAGGTGGTGCAAGGAGTGGAAAGAAAGGAGGAGAAGCCACGTGGCAGCGGCGGTGGTAGTGGAAGTGGTGGTGAATGTGAAAAGAAATTTGAAGTTGGTGATGAAGCGAGATCATGGTTGATGAAGGTGATACAGCGCATGATAGCGGATGAGGTTAGCAGTTACATTCAGAGCTTGCGGCACAACAATGCACCATCATCACCTTTCGACCTTGATCCACAAATACCCAAGTAA 852 0.5681 MMKSNGGDRIKGSWSPEEDATLLKLVAQHGARNWSAISSGIPGRSGKSCRLRWCNQLSPEVQHRPFTPAEDSIILMAHKRHGNKWATISRLLPGRTDNAIKNHWNSTLRRRRNATAATGGGLSGATSSSSDFTPVPDSRKRQGDAVTIAGDDLFESSENYKRQRLEAVTVNVKGENNGYRDGYRDQIEEEEERVAVTTLSLLPPGEKVVQGVERKEEKPRGSGGGSGSGGECEKKFEVGDEARSWLMKVIQRMIADEVSSYIQSLRHNNAPSSPFDLDPQIPK* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0588 283 MobiDBLite consensus disorder prediction 111 136 - -
Aev07g0588 283 CDD SANT 65 108 IPR001005 -
Aev07g0588 283 Pfam Myb-like DNA-binding domain 11 57 IPR001005 -
Aev07g0588 283 Pfam Myb-like DNA-binding domain 65 107 IPR001005 -
Aev07g0588 283 PANTHER MYB PROTEIN-RELATED 5 217 - -
Aev07g0588 283 ProSiteProfiles Myb-like domain profile. 6 57 IPR001005 -
Aev07g0588 283 MobiDBLite consensus disorder prediction 208 235 - -
Aev07g0588 283 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Aev07g0588 283 CDD SANT 13 55 IPR001005 -
Aev07g0588 283 SMART sant 10 59 IPR001005 -
Aev07g0588 283 SMART sant 62 110 IPR001005 -
Aev07g0588 283 SUPERFAMILY Homeodomain-like 9 104 IPR009057 -
Aev07g0588 283 Gene3D - 10 62 - -
Aev07g0588 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 61 IPR017930 -
Aev07g0588 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 112 IPR017930 -
Aev07g0588 283 Gene3D - 65 111 - -
Aev07g0588 283 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 5 217 - -
Aev07g0588 283 MobiDBLite consensus disorder prediction 111 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0588 Aev-Chr7 3629237 3630088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0588 8 111 MYB Transcription Factor Family AT4G37260 75.000 4.55e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev07g0588 Myb_DNA-binding 2.4e-17 CL0123