Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0586 ATGTCGAACCACGACCCTCACAAATTCGATTGGCACTTCGACACGGAGCTCGAGGACGAAACAATCGAGCTACGAGGCCGCAAACTCTTCTTCGTCATCGTCCTCTTCGCCATTGTCCTCTTCACCACCGCTCTCTTCCTCTACACGCGCTGGATCTGCCGCTCCCGCAGCCTCTTACCAACTACAACCACCACCACAACCGCGGCAACATCGCTCCACGCGCCGCCGCAATCTGAAGGCCTCGACGCCGCCGTGATCAAGAAGCTGCCGATTGTGCTGTATCAGGTTGCGGCGTCGCCGGATCCGAACAGCGGCGGCGCGTTGGTTGAGTGCTGCATCTGCCTGAGCGCGTTCCGTGACGGCGAGAAGCTGAAGGTTCTTCCGGTTTGCGAGCATTGTTTCCACTGCGAGTGTGTTGATAAGTGGCTCACGAATCACTCTAGCTGTCCGTTATGTAGAGCTTCACTGAAGCTCGATCCTTCTTCCTTCCCCAAGATTTTGATTCAAGAACCTCCTATTAGGATTAATGACCGATTCTGA 540 0.5537 MSNHDPHKFDWHFDTELEDETIELRGRKLFFVIVLFAIVLFTTALFLYTRWICRSRSLLPTTTTTTTAATSLHAPPQSEGLDAAVIKKLPIVLYQVAASPDPNSGGALVECCICLSAFRDGEKLKVLPVCEHCFHCECVDKWLTNHSSCPLCRASLKLDPSSFPKILIQEPPIRINDRF* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0586 179 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Aev07g0586 179 SMART ring_2 111 152 IPR001841 -
Aev07g0586 179 Pfam Ring finger domain 110 153 IPR001841 -
Aev07g0586 179 PANTHER RING-H2 FINGER PROTEIN ATL66 3 168 - -
Aev07g0586 179 SUPERFAMILY RING/U-box 89 163 - -
Aev07g0586 179 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 158 IPR013083 -
Aev07g0586 179 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 3 168 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0586 Aev-Chr7 3622378 3622917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0586 11 162 C3H Transcription Factor Family AT3G11110 40.789 5.03e-34 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0586 - - adu:107496923 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0903 03 7412578 7413117 Aev07g0586 07 3622378 3622917 PCT