Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0581 ATGAAGGAGAATTCCATAGCAATTACACCTAATGTTCGTGATGAATTTCGTTGCCCGATTTCGCTTGACTTGATGAGAGACCCTGTGATTGTATCATCCGGGCACACTTATGATCGGAATTCGATTGCTCAATGGATAAATTCTGGTCACCACACTTGTCCCAAAAGTGGGCAGAGGCTAATTCACACTGCTCTGATACCAAACTATGCATTGAAGAGTCTTGTTCAGCTATGGTGCTATGACAATAATATTCCGGTTCATGAGCCTAATTCTGATCAGGGAGACAACAGAAAGAAGAGAAACTTGAGACAGAACAATAATAATGCTGTTGATCATATCTCAGCAAACAAAGCAGCTTCAGATGCTGTTAAAATGACAGCAGCGTTCTTAGTTGGGAAACTTGCAACAGGCTCTGCTGATACACAGAGACAAGCTGCCTATGAACTCCGGTTACTCGCGAAAACCGGCATGGACAATAGAAGGATCATAGCAGAGGTAGGTGCTATCCCCTTTCTTGTAACACTTCTAGGATCACATGATCCTAGAATCCAGGAACATGCTGTGACAGCTTTGTTCAACCTCTCAATATATGAAAACAACAAGATCCTAATCATGTCAGCAGGAGCAGTTCACAACATAGTTGAAGTTCTTGAAAAAGGCAGGACAATGGAGGCAAGAGAGAATGCTGCAGCAACAATATTCAGCTTGTCAATGGTAGATGAATGTAAGGCTCAAATCGGGGCGCGGCCGAGGGCGATTCTTGCATTAGTAGAACTATTAAAAGAAGGAACACCAATTGGTAAAAGGGATGCTGCAACTGCACTTTTCAACCTTGCATTGTACAATCCAAACAAAGCAAGTATAGTTGATGCTGGTGCTATTGATGTTCTTGTTGATTTGTTAATGGATGACAAAGCAGGAATAACAGATGATATATTATCTGTTCTTGCTCTGCTACTTGGTTGCTCTCAAGGGCTAATAGAGATAAGAAATAGCAGAAATTTGGTGCCTCTTCTTATTGATCTTCTTAGATTTGGATCAATTAAAGGGAAAGAGAATTCTATAACACTTTTGTTAGGATTGTGCAAAGAAGAGACTGAAATGATTGCGAGGCGCCTATTGGCGAATCCAAGGAGTGTTCCTTCTCTTGAGAGCTTGGCTGCTCATGGTTCATTGAGAGCTAGGAGAAAAGCTGATGCATTGTTAAGGTTACTTAATAGGTGCTGCTCTCAGGATCAATATCATTCTGTATGA 1254 0.4131 MKENSIAITPNVRDEFRCPISLDLMRDPVIVSSGHTYDRNSIAQWINSGHHTCPKSGQRLIHTALIPNYALKSLVQLWCYDNNIPVHEPNSDQGDNRKKRNLRQNNNNAVDHISANKAASDAVKMTAAFLVGKLATGSADTQRQAAYELRLLAKTGMDNRRIIAEVGAIPFLVTLLGSHDPRIQEHAVTALFNLSIYENNKILIMSAGAVHNIVEVLEKGRTMEARENAAATIFSLSMVDECKAQIGARPRAILALVELLKEGTPIGKRDAATALFNLALYNPNKASIVDAGAIDVLVDLLMDDKAGITDDILSVLALLLGCSQGLIEIRNSRNLVPLLIDLLRFGSIKGKENSITLLLGLCKEETEMIARRLLANPRSVPSLESLAAHGSLRARRKADALLRLLNRCCSQDQYHSV* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0581 417 SMART Ubox_2 15 78 IPR003613 GO:0004842|GO:0016567
Aev07g0581 417 SUPERFAMILY ARM repeat 129 405 IPR016024 -
Aev07g0581 417 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 86 IPR013083 -
Aev07g0581 417 Pfam Armadillo/beta-catenin-like repeat 282 317 IPR000225 GO:0005515
Aev07g0581 417 Pfam Armadillo/beta-catenin-like repeat 158 195 IPR000225 GO:0005515
Aev07g0581 417 CDD RING-Ubox_PUB 16 58 IPR045210 -
Aev07g0581 417 SUPERFAMILY RING/U-box 10 87 - -
Aev07g0581 417 Pfam U-box domain 14 82 IPR003613 GO:0004842|GO:0016567
Aev07g0581 417 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 167 209 IPR000225 GO:0005515
Aev07g0581 417 Gene3D - 246 405 IPR011989 -
Aev07g0581 417 Gene3D - 99 245 IPR011989 -
Aev07g0581 417 PANTHER U BOX DOMAIN-CONTAINING 8 413 - -
Aev07g0581 417 SMART arm_5 242 280 IPR000225 GO:0005515
Aev07g0581 417 SMART arm_5 156 196 IPR000225 GO:0005515
Aev07g0581 417 SMART arm_5 281 321 IPR000225 GO:0005515
Aev07g0581 417 SMART arm_5 197 238 IPR000225 GO:0005515
Aev07g0581 417 SMART arm_5 322 363 IPR000225 GO:0005515
Aev07g0581 417 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 1 8 413 - -
Aev07g0581 417 ProSiteProfiles U-box domain profile. 11 85 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0581 Aev-Chr7 3571501 3572834 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0581 10 417 U-box Gene Family AT3G46510 47.445 1.05e-106 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0581 - - gmx:100793498 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0581 07 3571501 3572834 Aev07g0581 07 3571501 3572834 ECH