Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0573 ATGGCTTCTTGCCAAGAAACCACAGGCAGAAACACCACACGAAAAAGAAAGAACAGCAAGAACCGCGTAACCTTCTCTAAGAGAAAATCGGGGCTTTTCAACAAGGTCACTGAACTTTCCATCCTTTGCCAAGCAGAAACCGCTTTGATCATCACATCCCCAGACGGCAAGCTCTACACATGCGGCTACCCCACTCCGGACACCGTCATCCGCCGCTTCCTCGCCGGAGGGTCGTCCTCTTCGAACCATGCACCACGTGGAGAAGAGGAGAAGCAGAAAGAGAAAAGGATTGATGAGGTGGAAGCACTAAGAGTGCAATATGAGGCAACGCAAGAGATGTTGAAGGAAGAGAAGAAGCGTCGTGATGCCATGGAAGCAAACAAGAGCTTAATGGGGTTCCCTTCTTGGTGGGAAAACTCCATTGATGAGATGGGTTTGGAGGAGCTTGAGCAATTCAAGGCCTCATTGGAACAGTTAAAGATCAACCTTATGGCAACCATGGAAGGGAAGAGGGTCAATTCAATTATTCAGCCAATGCCCCTTCGTTCATCAGTGCTTCTAATGCCAATGTACTCGAATTTTCCTTCAGTCTTGAATGGAGGCATATGTACTGAGCAAGAACAAACATGGGGTTGGAGGAATAATGGTGTTGCCAGTAGCAGTAACAATGATAGTTCTTCTGGAACTTTGGATTACAGGAACCAATGTATTGGGCAAGAACAAGCATGGGGTTGGAGCAACAATGGTATTTCTAGTGACAGTAACAGTATGTCTTTGGGAACATTGGGTTGGAGGAATAATGGTATCCTTAGTAGCAATAATAGTTCTTTGGTTCCAAATATTGGTTTTGGACATTATTGTCACAATGACACAATTAG 878 0.4533 MASCQETTGRNTTRKRKNSKNRVTFSKRKSGLFNKVTELSILCQAETALIITSPDGKLYTCGYPTPDTVIRRFLAGGSSSSNHAPRGEEEKQKEKRIDEVEALRVQYEATQEMLKEEKKRRDAMEANKSLMGFPSWWENSIDEMGLEELEQFKASLEQLKINLMATMEGKRVNSIIQPMPLRSSVLLMPMYSNFPSVLNGGICTEQEQTWGWRNNGVASSSNNDSSSGTLDYRNQCIGQEQAWGWSNNGISSDSNSMSLGTLGWRNNGILSSNNSSLVPNIGFGHYCHNDTI 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0573 292 SUPERFAMILY SRF-like 16 74 IPR036879 GO:0003677|GO:0046983
Aev07g0573 292 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 19 177 - -
Aev07g0573 292 Gene3D - 17 99 IPR036879 GO:0003677|GO:0046983
Aev07g0573 292 PRINTS MADS domain signature 7 27 IPR002100 GO:0003677|GO:0046983
Aev07g0573 292 PRINTS MADS domain signature 27 42 IPR002100 GO:0003677|GO:0046983
Aev07g0573 292 PRINTS MADS domain signature 42 63 IPR002100 GO:0003677|GO:0046983
Aev07g0573 292 MobiDBLite consensus disorder prediction 75 95 - -
Aev07g0573 292 PANTHER MADS BOX PROTEIN 19 177 - -
Aev07g0573 292 Coils Coil 90 127 - -
Aev07g0573 292 SMART madsneu2 8 64 IPR002100 GO:0003677|GO:0046983
Aev07g0573 292 MobiDBLite consensus disorder prediction 1 22 - -
Aev07g0573 292 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 17 60 IPR002100 GO:0003677|GO:0046983
Aev07g0573 292 ProSiteProfiles MADS-box domain profile. 14 65 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0573 Aev-Chr7 3526239 3527116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0573 15 172 Type I MADS-box Gene Family AT5G60440 36.747 8.60e-23 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Aev07g0573 SRF-TF 1.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0573 - - ahf:112729126 214.542