Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0565 ATGGGTGGGAATTCACCGTGTGCTTCATGCAAGCTTCTGAGACGAAGGTGCACCAAAGACTGCACCTTTGCTCCTTATTTCCCTTCTGATGAACCCCAAAAGTTTGCCATAGTTCACAAGGTTTTTGGAGCTAGCAACGTTAGCAAAATGTTACAGGAACTTCCAATTCATCAGAGAGCAGATGCAGTGAGCAGTTTAGTGTATGAGGCAAATGCAAGAGTTAGAGACCCCGTATATGGTTGTGTTGGAGCCATATCATTCCTTCAGAATCAGGTCTCTGAGCTCCAAATGCAGCTTGCAGTGGCACAAGCAGAGATACTGTGCATCCAGATGCAGCAAGACCCTGTGATCCAACCAGACCCTCAATTCTATCAGGACCAATATCAGAAATCTTATTTTCTCCAAAATGACCTCACTCAGTGCCTCAATTTTGGATCCTCTAGCACTACTAGTAGTACCAATGTTGTAATTCATGACTCTTTCAAGAGAGAGACCGTTTTTGGACATGACATGGTTTCTTGA 522 0.4406 MGGNSPCASCKLLRRRCTKDCTFAPYFPSDEPQKFAIVHKVFGASNVSKMLQELPIHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSELQMQLAVAQAEILCIQMQQDPVIQPDPQFYQDQYQKSYFLQNDLTQCLNFGSSSTTSSTNVVIHDSFKRETVFGHDMVS* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0565 173 Coils Coil 85 105 - -
Aev07g0565 173 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Aev07g0565 173 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Aev07g0565 173 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 167 - -
Aev07g0565 173 PANTHER LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0565 Aev-Chr7 3482425 3483712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0565 3 134 AS2 family AT2G30130 79.699 9.03e-75 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev07g0565 LOB 2.7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0565 - - lang:109360574 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0565 07 3482425 3483712 Aev07g0565 07 3482425 3483712 ECH
Aev03g0930 03 7639696 7642156 Aev07g0565 07 3482425 3483712 PCT