Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0560 ATGGTGATCACTGTCGAAAAGCAGAACTGTTATCTAGACATGGGTGCTTATGATCAAGGTTCTAATATCAATCTTGTGCCATTGGATTCTTCTAGAAAGAGGAAAAGTAGGAGTAGAAGGGATGGGTCTAGATCTGTTGCTGAGACTATTGCAAAGTGGAAGGAATACAATGAGCATCTTGAGTCTGGTAAAGAGGATGGTAAGCCAACTCGGAAAGCACCAGCCAAGGGTTCAAAGAAAGGGTGCATGAAAGGGAAAGGAGGACCCCAAAATTCAGAGTGTAACTACAGGGGTGTTAGGCAGAGGACTTGGGGAAAATGGGTTGGTGAGATTAGGGAGCCAAATAGAGGGAGTAGGCTTTGGTTGGGCACTTTCTCTACTGCACAAGAAGCTGCTCTCGCATATGATGAAGCTGCTAGGGCTATGTATGGCCCTTCTGCAAGACTCAACTTCCCCCATATAACTGATTATGAGTCGATTAAGGATTCATTGAAGGAATCTTCTATAGCTGCCACTTGTTCTACTAGCTCTTCTGTGACTACTCCTGCGGGTTCTGACACAACTACCATATCAGATCATTCCGAGGTTTGTGCAGCTGAGGAAGTCAGGGAGAAACCGCGAGTTAACGATGCAAACAATGCTGTCAATGGTTCTTATAGGGCTTACGAGTCTGCCTCTCCTACTAGCAAGGTAAAGCAGGAGCCACTGGAAGAGACTGTAGAACTTGCGGACCTTGGTGGAGGGGAAATCCAAGATACCATACCTGATGAAGGACTTGATTTTGGACAGGTTTCCATGGACGAATTAAATAGGGATCCAATGGACTTATCATGGATTGATGGTTTTGATTTAGATGGTGATTACTTGAAGAATTTCTCCACAGATGAGTTGTTTCAAGTAGATGAACTTTTGGGGGATATAGACAACAATCCAATTGATAACTCTGGACTGATGCAAACTTTGGATTTTGGTCAGATGGATATTCCTATGGACCGTAATCCTCAGGCTGGGATGCCTTCAAGCTATTTATATGAACTGCAGAATCCAGATGCCAAGCTACTGGGAAGTTTGCCCCATATGGAACAAACCCCAGCAGGTGTCGATTACGGGTTGGATTTCTTGAAAGCTGAAGAGCCAGAGGACTATAATGGTGGACGGGAAGATCAGCGGTTTCTCAATTTGGAATATCTGAACAATAATTCAAAAGAGGAACATCCAAACAAAGAAGGATAA 1233 0.4396 MVITVEKQNCYLDMGAYDQGSNINLVPLDSSRKRKSRSRRDGSRSVAETIAKWKEYNEHLESGKEDGKPTRKAPAKGSKKGCMKGKGGPQNSECNYRGVRQRTWGKWVGEIREPNRGSRLWLGTFSTAQEAALAYDEAARAMYGPSARLNFPHITDYESIKDSLKESSIAATCSTSSSVTTPAGSDTTTISDHSEVCAAEEVREKPRVNDANNAVNGSYRAYESASPTSKVKQEPLEETVELADLGGGEIQDTIPDEGLDFGQVSMDELNRDPMDLSWIDGFDLDGDYLKNFSTDELFQVDELLGDIDNNPIDNSGLMQTLDFGQMDIPMDRNPQAGMPSSYLYELQNPDAKLLGSLPHMEQTPAGVDYGLDFLKAEEPEDYNGGREDQRFLNLEYLNNNSKEEHPNKEG* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0560 410 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 28 381 - -
Aev07g0560 410 MobiDBLite consensus disorder prediction 30 47 - -
Aev07g0560 410 Gene3D AP2/ERF domain 95 154 IPR036955 GO:0003700|GO:0006355
Aev07g0560 410 SMART rav1_2 95 158 IPR001471 GO:0003700|GO:0006355
Aev07g0560 410 MobiDBLite consensus disorder prediction 28 47 - -
Aev07g0560 410 CDD AP2 94 153 IPR001471 GO:0003700|GO:0006355
Aev07g0560 410 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 28 381 - -
Aev07g0560 410 PRINTS Ethylene responsive element binding protein signature 96 107 IPR001471 GO:0003700|GO:0006355
Aev07g0560 410 PRINTS Ethylene responsive element binding protein signature 118 134 IPR001471 GO:0003700|GO:0006355
Aev07g0560 410 SUPERFAMILY DNA-binding domain 95 153 IPR016177 GO:0003677
Aev07g0560 410 MobiDBLite consensus disorder prediction 57 73 - -
Aev07g0560 410 ProSiteProfiles AP2/ERF domain profile. 95 152 IPR001471 GO:0003700|GO:0006355
Aev07g0560 410 Pfam AP2 domain 94 144 IPR001471 GO:0003700|GO:0006355
Aev07g0560 410 MobiDBLite consensus disorder prediction 57 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0560 Aev-Chr7 3441851 3443083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0560 21 395 AP2-EREBP Transcription Factor Family AT2G40340 40.106 2.01e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev07g0560 AP2 1.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0560 - K09286 gmx:100800134 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0560 07 3441851 3443083 Aev07g0560 07 3441851 3443083 ECH