Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0541 ATGGTTTCTAGAGAGCAAAAGAGAGAAGCACTGCATGAGAAGCTCCAACTCCTTCGTTCTATTACACACTCTCATGCTGTGAACAAAAGCTCGATCATAATGGATGCATCGAAGTATATTGAAGAGCTGAAACACAAGGTAGAGAGATTGAATCAAGAGATAGCCTCAGCGGAAACTACTTCACATCACCATCACAATCATCCCTTGCCTATGGTTACAGTAGAGACCTTAGAAAAGGGATTCCTCATAAATGTGTATTCAGCAAGAAGCTGCCAAGGTCTACTTGTTTCAATACTTGAGGTCTTTGAAGATATGGGCCTCACAGTGCTTGAAGCTAGGGTTTCTTGTACGGACACTTTTCGATTTCAAGCAGTTGGAGGACAAAGTGAAGAACAAGGTGAGACTATTGATGCACAAGCTGTGAAACAAGCAGTGGGACAAGCAATAAGGAACTGGAGCCAAAATGCTGATGATGATTAA 480 0.4208 MVSREQKREALHEKLQLLRSITHSHAVNKSSIIMDASKYIEELKHKVERLNQEIASAETTSHHHHNHPLPMVTVETLEKGFLINVYSARSCQGLLVSILEVFEDMGLTVLEARVSCTDTFRFQAVGGQSEEQGETIDAQAVKQAVGQAIRNWSQNADDD* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0541 159 CDD ACT_UUR-ACR-like 82 149 - -
Aev07g0541 159 Gene3D - 3 66 IPR036638 GO:0046983
Aev07g0541 159 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 157 - -
Aev07g0541 159 Coils Coil 33 60 - -
Aev07g0541 159 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 157 - -
Aev07g0541 159 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 64 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0541 Aev-Chr7 3331300 3332981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0541 11 151 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 28.758 3.59e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0541 - - tcc:18600910 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0971 03 8056572 8060459 Aev07g0541 07 3331300 3332981 PCT