Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0504 ATGGAAAACTCAGACCACAACGAACCCGACAAGAAGAGACCTCATCTCACCTCTGTTTCCAACCGCATGGCTCGAAACTCAGCCAACCCTCCTTCCAACAACAAAACCGCTGATGCAGGAGTCTTACAGGCACAGAACCAGCAGCTTGTTCAACAGATAGACGTCCAAAAGCGTGCTTTGCATGACCTTGAAGAAAAGATTAGAGAGTTAAAGGAGCAGCAAAATTCTTATGATGACTCGTTAATCGAAGTGGACCAACACTGGATTCAGTTATCTGATGATCTGATTCTTCTTGGCATACGAGCTGGTAGAGGCAAAGATGCATTGCAATCGATAGATTACCCTAATAATCCCCAAGGTTCATTTCCTTCATGTCCTGCAGAGGATATATTTCTATGTAGGTTGATCCAGAAAGATTCTGTTGAAGGAAGCAATAGTGGTGAAATTCTTAATTACATTGAGGAAAGCCTTGCTTTACGTCAGTCATCTACAATGGAGTTGTTGAAACTCCTTCAAGATACCATGGATGAACAGAGGGAAAGAACTGACAGTATAGCCCAGGCTTTGCATGAAGAGTTATCCTCTGAAGACGCTATCCTTCAAATGTCTAAGATTGATGATATGATGAAAGAGGAGGCAAATAATTTAAGTGAAATCATTGATGCTCTCCATTTGAGGCATGAAGAGTATACTACTGGTATTCAAAATTATATCAGCTGCTGCTTACAAGATCAATCCGACATTAAACGCCTTGCAGGTGACCTTGATGAGACCATAGCTGAACTTGAAGAGAGTAGAAGAAAACTAGTCAGTCTGAAAATGCAAAAGGATGTGGTGGCAGGGATGCATTCCCCTAGTGCAGATGCAGTGAATGGAAACTTGTCTCCTGAAAAACCTGCAGATAGGACTTTGAGTTTGCGTGAGTTGAAGGATTCAATTGAGGAAGCAAAGATTGTGAATGCCGATCGTCTTTCTGAGCTTGAAGACGCACAGGAGGAAAATCAAACCTTGACACAGCAATTCCAAGATTTTCAGAATGAACTGAATGATGAAAAGTATGTACGCTCTTCCCGGATATACTCTTTGGCAAATGATCAACTCCAACATTGGGTTGCTGAATTGGCTCGGTATAAAATGTTAATAGAATCTCTGCAGGCTGGAAGTGTCCATGTCGCAAAATGGGAGAAGGATCTGAATTCAAAATTGGAGTCTGTTGATACTGCAAGGCATGCCATTGACAATTCTAATTCTAGGATTGAAGAGCTAGAGCTTCAGTTGCAGAAGTGTATTATTGAAAAGAATGATCTTGAAATTAAGATGGAAGAGGCTATACAGGATACTGGGAGAAAAGATATCAAATCCGAGTTCCATGTGATGGCTTCAGCCTTGGCTAAAGAAATGGGGATGATGGAAGCTCAATTGAAGCGATGGAAGGATGCTGCTCATGAGTCTGTATCATTACGTGAGAAAGCTCATTCACTACGAGCATTGTTGAGTGGGAAGACAAGTGAACTTAAGAGCCTTGTAAACAAATCTACTGAGCAGGAGTCAGAAATCAAGTCCTTAAAAGCATTGATTGAAAAGCTACAGAAGGAGAATCTGGAGTTAGAATTCATTGCAGATATGCATGGACAGGAGAACTATGATAAAAGTACTGTGGCAGAAATTAGAGAATCTGAAAGTAAAGCTCGCGCTCAAGCTGAAATGCTGAAAAATGCTTTAGATGAACATGGTCTAGAATTGAGAGTAAAAGCTGCTAATGAAGCTGAAGAAGCTTGTAAACAAAGGCTGTCTGCTGCAGAAGCCGAACTAGAGGACTTGAGGGCCCAGCTGGATGAATCCAAGAGAGGTGTTTTGGAGCTGAAGGAGGCTATTAAAGTGAAAGATGCTGAGGCAGAGGCGTATATATCTGAAATTGAGACTATTGGTCAAGCATATGAAGATATGCAGACACAGAACCAACGTCTGTTGCAGCAGGTAGCTGAGAGGGATGACTATAATATTAAGCTTGTGTCAGAAAGTGTGAAGACAAAACAGGTTCATAATTCTTTGCTGTCTGAGAAGCAAGCCTTGGCAAAGCAACTTCAACAACTTCATGCTTTAATGGACAATTCTAAAATGAAGATTGCACAAATTGAAGAGCAGATGAAGACTCTTATATCGGAAGCCATTAAAAGTAATCAGGCTGATAAACACCTTCATCTCGCTCTGGAATTTGCAAAGTGGGAATTGGCTGACGCTGAGAAGGAGTTGAAGTGCCTGAAGTCTGCTGTTTCCTCTGCGGAGAAAGAATACGATCAAATACAGAAAGATATACAAGCAGTTGAAATGGAATTGGAGAGTGAAAGGAATTCACGGAAGAAGCTTGAGGAAGAACTCAGGGAACTGAACAACCAAATCGAGGAGTTGAGCTCTGAAACCGGAGAAGCTGCGATACAAAAGCTTGAAGCAGAAATCAAGGTTTGCAAGAACATGATCAAGTGTACTGTCTGTTCTGATCGTCCCAAAGAGGTTGTGATTGTCAAGTGCTATCATCTGTTCTGCAATCCATGCATACAGAGGAATCTAGAGCTCAGACACCGCAAATGTCCTGCTTGTGGAACAGCATTTGGGCAGAGTGATGTTCGCTTTGTTAAAATATGA 2643 0.4158 MENSDHNEPDKKRPHLTSVSNRMARNSANPPSNNKTADAGVLQAQNQQLVQQIDVQKRALHDLEEKIRELKEQQNSYDDSLIEVDQHWIQLSDDLILLGIRAGRGKDALQSIDYPNNPQGSFPSCPAEDIFLCRLIQKDSVEGSNSGEILNYIEESLALRQSSTMELLKLLQDTMDEQRERTDSIAQALHEELSSEDAILQMSKIDDMMKEEANNLSEIIDALHLRHEEYTTGIQNYISCCLQDQSDIKRLAGDLDETIAELEESRRKLVSLKMQKDVVAGMHSPSADAVNGNLSPEKPADRTLSLRELKDSIEEAKIVNADRLSELEDAQEENQTLTQQFQDFQNELNDEKYVRSSRIYSLANDQLQHWVAELARYKMLIESLQAGSVHVAKWEKDLNSKLESVDTARHAIDNSNSRIEELELQLQKCIIEKNDLEIKMEEAIQDTGRKDIKSEFHVMASALAKEMGMMEAQLKRWKDAAHESVSLREKAHSLRALLSGKTSELKSLVNKSTEQESEIKSLKALIEKLQKENLELEFIADMHGQENYDKSTVAEIRESESKARAQAEMLKNALDEHGLELRVKAANEAEEACKQRLSAAEAELEDLRAQLDESKRGVLELKEAIKVKDAEAEAYISEIETIGQAYEDMQTQNQRLLQQVAERDDYNIKLVSESVKTKQVHNSLLSEKQALAKQLQQLHALMDNSKMKIAQIEEQMKTLISEAIKSNQADKHLHLALEFAKWELADAEKELKCLKSAVSSAEKEYDQIQKDIQAVEMELESERNSRKKLEEELRELNNQIEELSSETGEAAIQKLEAEIKVCKNMIKCTVCSDRPKEVVIVKCYHLFCNPCIQRNLELRHRKCPACGTAFGQSDVRFVKI* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0504 880 Coils Coil 405 446 - -
Aev07g0504 880 Coils Coil 313 347 - -
Aev07g0504 880 Coils Coil 556 576 - -
Aev07g0504 880 Coils Coil 695 729 - -
Aev07g0504 880 Pfam Zinc finger, C3HC4 type (RING finger) 827 869 - -
Aev07g0504 880 SUPERFAMILY RING/U-box 827 871 - -
Aev07g0504 880 Coils Coil 583 624 - -
Aev07g0504 880 Gene3D - 738 826 - -
Aev07g0504 880 MobiDBLite consensus disorder prediction 1 38 - -
Aev07g0504 880 CDD RING-HC_BRE1_like 826 867 - -
Aev07g0504 880 Coils Coil 505 542 - -
Aev07g0504 880 ProSitePatterns Zinc finger RING-type signature. 843 852 IPR017907 -
Aev07g0504 880 Coils Coil 46 83 - -
Aev07g0504 880 MobiDBLite consensus disorder prediction 19 38 - -
Aev07g0504 880 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 827 878 IPR013083 -
Aev07g0504 880 Coils Coil 639 659 - -
Aev07g0504 880 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BRE1 10 880 - -
Aev07g0504 880 MobiDBLite consensus disorder prediction 1 17 - -
Aev07g0504 880 SMART ring_2 828 866 IPR001841 -
Aev07g0504 880 PANTHER RING FINGER PROTEIN-RELATED 10 880 IPR013956 GO:0004842|GO:0010390
Aev07g0504 880 Coils Coil 737 813 - -
Aev07g0504 880 Coils Coil 248 275 - -
Aev07g0504 880 ProSiteProfiles Zinc finger RING-type profile. 828 866 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0504 Aev-Chr7 3102880 3114453 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0504 812 875 RAD5 or RAD16-like Gene Family AT5G05130 32.812 6.14e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0504 K10696 - gmx:100796610 1285.4