Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0501 ATGCCAGAAAACAGGCAGGTTCTGAGGAATGCTGCTTCTAATCATCAATCCGGTGACAACATTGAAGATGCAATTCGGCGATTGAAAATCAATGATAATCGCGATAGAGATGCTACAGGTCAATCTAACCAATATCCAGATCGACCCGGCGAACCTGACTGCTTATATTTTTTGAGGACTGGGATGTGTGGTTATGGGATTAACTGTCGCTACAATCACCCTGCTCATGTTTCAATTGGTACTCATTATGGTGAAGAGCTCCCTGAGAGAGTTGGGCAACCGGATTGCGAGTATTTTCTTAAGACAGGGACATGCAAGTATGGACCGACATGTAAATATCATCATCCGAGGGACAGGCGAGGTGCTGCTCCTGTTTCATTCAATGCTTTAGGTCTGCCTATGCGCCAGGAAGAAAAATCATGCCCCTATTACATGAGAACCGGGTCTTGTAAGTTTGGAGTTGCCTGCAAGTTTCATCATCCCCCGCATAATTCCTTTGGAGCTTCCCCGGTGGCCGGATCTCCTACCTCAACAATGATTTCTGCATCGGGATATGTTGGCGGATTTCCTGCGTGGCCGTTACAGAGAATGTCATATTTATCTGGTCAGGGCCTTCAATCTTATGTGCCTCCATTCTTCTCTTCGCCGCAAGGCATTATACCTGCACAGAGCTGGAACAGCTATATGGGAAGTATGAACCCTGCCATGTCCACTGGTTTTCTCGGTTACGACTCCATGAATCTGGGCGAGTCACTCTCAGGTGGGCAGGTAATGAGTCCACCTCTCCCGGATAGACCTGATCAACCGGAATGCAGATACTTTATGAGCACTGGGACCTGCAAATACGGATCTGATTGCAAGTTTCACCACCCGAAAGAAAGAATCAACCAATCTTTCATAAATCCACTTGGCCTTCCTGTGAGACCTGGGCAAGCTGTGTGTTCTTACTACAAAATCTATGGCATATGCAAGTATGGGCCAACATGCAAATTTGATCATCCAGTTATGGCAGTGACTCAGAACTATGGCGTGGCGACACCTGCTTTATCTGTTCTTGATACATCTCCCATTGGTAATCCAAGAGGGAATGTCCAACCACCCGATCAGACATCTCCGTCTAAACTAGCAAGCGACAAGCATCAGCACTCTGATGATACAACGAAAGCTACGGAGGATTCGTCCAAACAGGCTGACAATACAACAAAAGTTACTGAAGATTCCGTCTCGGCCTCCTCGGAGTCCTTACAGGACCAAACAGCTTGA 1263 0.4695 MPENRQVLRNAASNHQSGDNIEDAIRRLKINDNRDRDATGQSNQYPDRPGEPDCLYFLRTGMCGYGINCRYNHPAHVSIGTHYGEELPERVGQPDCEYFLKTGTCKYGPTCKYHHPRDRRGAAPVSFNALGLPMRQEEKSCPYYMRTGSCKFGVACKFHHPPHNSFGASPVAGSPTSTMISASGYVGGFPAWPLQRMSYLSGQGLQSYVPPFFSSPQGIIPAQSWNSYMGSMNPAMSTGFLGYDSMNLGESLSGGQVMSPPLPDRPDQPECRYFMSTGTCKYGSDCKFHHPKERINQSFINPLGLPVRPGQAVCSYYKIYGICKYGPTCKFDHPVMAVTQNYGVATPALSVLDTSPIGNPRGNVQPPDQTSPSKLASDKHQHSDDTTKATEDSSKQADNTTKVTEDSVSASSESLQDQTA* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0501 420 PANTHER PROTEIN PHOSPHATASE RELATED 3 398 - -
Aev07g0501 420 SMART c3hfinal6 90 117 IPR000571 GO:0046872
Aev07g0501 420 SMART c3hfinal6 137 162 IPR000571 GO:0046872
Aev07g0501 420 SMART c3hfinal6 308 335 IPR000571 GO:0046872
Aev07g0501 420 SMART c3hfinal6 48 75 IPR000571 GO:0046872
Aev07g0501 420 SMART c3hfinal6 265 292 IPR000571 GO:0046872
Aev07g0501 420 SUPERFAMILY CCCH zinc finger 306 334 IPR036855 GO:0046872
Aev07g0501 420 MobiDBLite consensus disorder prediction 353 374 - -
Aev07g0501 420 ProSiteProfiles Zinc finger C3H1-type profile. 308 336 IPR000571 GO:0046872
Aev07g0501 420 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26 3 398 - -
Aev07g0501 420 MobiDBLite consensus disorder prediction 353 420 - -
Aev07g0501 420 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 310 334 IPR000571 GO:0046872
Aev07g0501 420 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 93 117 IPR000571 GO:0046872
Aev07g0501 420 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 50 74 IPR000571 GO:0046872
Aev07g0501 420 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 139 162 IPR000571 GO:0046872
Aev07g0501 420 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 267 292 IPR000571 GO:0046872
Aev07g0501 420 Gene3D - 121 169 - -
Aev07g0501 420 ProSiteProfiles Zinc finger C3H1-type profile. 135 163 IPR000571 GO:0046872
Aev07g0501 420 MobiDBLite consensus disorder prediction 375 392 - -
Aev07g0501 420 SUPERFAMILY CCCH zinc finger 53 75 IPR036855 GO:0046872
Aev07g0501 420 Gene3D - 45 120 - -
Aev07g0501 420 Gene3D - 263 344 - -
Aev07g0501 420 SUPERFAMILY CCCH zinc finger 94 119 IPR036855 GO:0046872
Aev07g0501 420 ProSiteProfiles Zinc finger C3H1-type profile. 48 76 IPR000571 GO:0046872
Aev07g0501 420 ProSiteProfiles Zinc finger C3H1-type profile. 90 118 IPR000571 GO:0046872
Aev07g0501 420 ProSiteProfiles Zinc finger C3H1-type profile. 265 293 IPR000571 GO:0046872
Aev07g0501 420 SUPERFAMILY CCCH zinc finger 269 295 IPR036855 GO:0046872
Aev07g0501 420 SUPERFAMILY CCCH zinc finger 134 163 IPR036855 GO:0046872
Aev07g0501 420 MobiDBLite consensus disorder prediction 393 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0501 Aev-Chr7 3086442 3089823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0501 4 388 C3H Transcription Factor Family AT1G04990 47.462 2.52e-114 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev07g0501 zf-CCCH 9.3e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0501 - - vra:106765262 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0501 07 3086442 3089823 Aev07g0501 07 3086442 3089823 ECH