Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0466 ATGGATTTTGAGCTTCGAAGAGCGAGAGAGAAGCTTGAGAAAGAGCAGAAAGAGAGGAAGGAGAGGGCGAGATTGAAGCTTCAGAAGGAAAAGAAGGCCAAAGAGGAGGCTACCAAGCTTAGGGAAGCCATTGAAGCCGCTCAGCGTTCTCGTCGTATCGATGCTGCCGAAGCTCAACTCAAGGCTGACCAACAGATGCAAGAGAACCTTATTGCTGGGAGAGGGATTGTGTTTTATCGATTGCTAGAAGCTGTACCTTATCAAGGTAGTGGAGATAAGATAAAGCTGCCTCCTTCTTGCTTCACAGAATTGTCTGATCAGGGTGCTCTCGACAAGGGACCAATGTACTTTGAGTTGTCACTAGTTCAAGCCGAAGGTTCTTCAGGTACCAAAGATACGTATAAAGAGAAAGAAGGCACCACCCATTCAGGAGTTTTGGAATTCACTGCTGAAGAAGGTTCAGTTGGTCTTCCTCCTCATGTATGGAATAATTTATTTACTGAAGGCTCTATTAAATCTCCATTAGTTGAAGTACGCTATGTTTGGCTTCCAAAAGGGACATATGCGAAACTTCAACCTGAAAGAGTTGGATTTTCTGATTTGCCAAATCATAAGGCTATCCTCGAAACAAGTCTCCGGCAGCATGCCACACTTTCCCAGGGTGACATTTTAACTGTGAACTATGGAGAACTCGAATACAAATTGAGGGTGCTAGAGTTGAAACCATCTACAAGTGTATCAGTTTTAGAAACAGATATTGAAGTTGACATAGTTGATTCTGAGATATCCTCAGAAAAGACCGATCAGCATGTTTTAATGCCGCTTGTGATCGGAACACCGCAAATTGGAATAGTAGATGAAGGGAAGTTTGTGTATTACAAATTTTCAATTGACAACGGTACCTGGGAGAAAATTGATGCTGGGAATTCTAGTGTTGAGGTAAAATTAGAATCAGAAACAGATGGCGGAGATACTGATCTTTTCATTTCTAGGCATCCTCTCATATTTCCTACATGGCATCAGCACGAGTGGTCTTCTCATGATATTGGTTCCAAGACTCTGATTCTTAGTTCTAAAGATAAAAATTTTAGAGCAGGGAGTTATAGCATTGGTATATATGGCTTTAAGGGAACGACCAAGTACAAAATATCAGTCATGATTCAAGAAAATATGAACCAAAAAGTGGGTCAGCAAGCGTCATCTTCCATGTCATCTGCTGAAATGGATACCGAACAATGTAGGAATTGCAAGCATTACATACCCTCTAGGACTATCGCGCTGCATGAAGCATACTGTAGCAGGCACAATGTTGTCTGCCAGCATCCAGGTTGTGGAGTTGTTCTTAGGATCGAAGAGTCCAAGAATCATTTTCACTGTGATAGGTGTGGTCAAGCTTTCCAGCATGCCGAATTGGAAAAGCACATGAAAGTCTTCCATGAGCCACTTCAATGCCCTTGTGGAATAATCCTTGAGAAAGAGCAAATGGTTGAGCACCAATCCTCAGTTTGCCCGTTGCGGTTGATTACATGTCGGTTTTGCGGTGATATGGTTCAAGCTGGAAGCTCCGCAATGGACGTGCGTGACAGATTAAGAGGATTGTGCGAGCATGAGAGTGTTTGTGGATCTCGCACTGCACCCTGTGATTCTTGTGGGCGTGCTGTGATGTTGAAGGACATGGACATTCACCAGATTGCTGTTCATCAAAAAGGCTAA 1713 0.4308 MDFELRRAREKLEKEQKERKERARLKLQKEKKAKEEATKLREAIEAAQRSRRIDAAEAQLKADQQMQENLIAGRGIVFYRLLEAVPYQGSGDKIKLPPSCFTELSDQGALDKGPMYFELSLVQAEGSSGTKDTYKEKEGTTHSGVLEFTAEEGSVGLPPHVWNNLFTEGSIKSPLVEVRYVWLPKGTYAKLQPERVGFSDLPNHKAILETSLRQHATLSQGDILTVNYGELEYKLRVLELKPSTSVSVLETDIEVDIVDSEISSEKTDQHVLMPLVIGTPQIGIVDEGKFVYYKFSIDNGTWEKIDAGNSSVEVKLESETDGGDTDLFISRHPLIFPTWHQHEWSSHDIGSKTLILSSKDKNFRAGSYSIGIYGFKGTTKYKISVMIQENMNQKVGQQASSSMSSAEMDTEQCRNCKHYIPSRTIALHEAYCSRHNVVCQHPGCGVVLRIEESKNHFHCDRCGQAFQHAELEKHMKVFHEPLQCPCGIILEKEQMVEHQSSVCPLRLITCRFCGDMVQAGSSAMDVRDRLRGLCEHESVCGSRTAPCDSCGRAVMLKDMDIHQIAVHQKG* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0466 570 Gene3D - 77 183 IPR042299 -
Aev07g0466 570 Gene3D - 282 394 - -
Aev07g0466 570 Coils Coil 5 50 - -
Aev07g0466 570 Pfam Ubiquitin fusion degradation protein UFD1 90 257 IPR004854 GO:0006511
Aev07g0466 570 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 478 530 IPR013083 -
Aev07g0466 570 PANTHER UBIQUITIN FUSION DEGRADATION UFD1 FAMILY PROTEIN 1 569 - -
Aev07g0466 570 PANTHER UBIQUITIN FUSION DEGRADATON PROTEIN 1 1 569 IPR004854 GO:0006511
Aev07g0466 570 Gene3D - 185 258 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev07g0466 UFD1 2.5e-48 CL0402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0466 - - gmx:100777384 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0466 07 2822023 2824638 Aev07g0466 07 2822023 2824638 ECH