Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0420 ATGGCTAAGAAGCGAAAGCTTCGTTCTTCCGAATCCGAAACCCCCAAACCCATCGAACAGGAACAAAGCCAACCACAACAAACCGAACAAGTAACACTAGATCAGCAACAAAACATGGCCCTCGATGAACCCGTTCCACCGCTAAACGACGTCGTTGAAGAGGAACAGCAACAGCAAGGAGAAGAGCAGCAAAACGACGAAGGAGAAGGGGAAGAACAACAGGAGGAGGAAGAAGAAGAAACCCTAGAAAACCAAGAGGACCAGCTTCAGGAGCAACCTTCGGGTTCTCAACCGGTTAGCGCTGAATCGAACGGCGCGGAGGCTGCTGCTGCGGCGGCATCGGAGGTAGAAGAGGACCTCGATTTGGAAGAAGAGCCCGTCGAGAAGCTTCTAGAACCATTCACGAGGGAGCAACTTCTCACGCTCGTGAAGCAAGCCGTTGAGAAGCACCCCGATTTTGCCGATAACGTCCGCCAGCTGGCAGAGGTGGACCCTGCACACCGCAAGATCTTCGTCCATGGCCTCGGCTGGGACGCCACCGCCGAAACCCTAACCTCCGTGTTCGGAAAATACGGCGAGATCGAGGATTGCAAAGCCGTAACGGACAAAGTCTCGGGGAAATCGAAAGGTTACGCTTTCATTCTGTTCAAAAACCGAATTGGGGCGCGTAGGGCACTGAAGCAGCCGCAGAAGAGGATTGGAAACAGAACGACTTCATGTCAATTGGCCTCTGCGGGTCCTGTCCCCGCACCACCGCCGAACGTGCCTCCTGTGGTTTCAGAGTACACGCAGAGGAAGATATTTGTGAGCAATGTGAGTGCTGATATTGATCCCCAGAAGCTGCTTGAGTTCTTCAAGCAGTTTGGTGAGGTTGAGGATGGCCCTCTTGGGCTTGATAAGGTTACTGGGAAGCCCAAAGGATTCGCGCTTTTCGTTTACAAGACTGTGGAGAGTGCAAAGAAGGCTTTGGAGGAGCCACACAAGAACTACGAGGGGCATACACTGTATTGCCAGAAGGCTGTTGATGGGCCTAAAGGGAGCAAAGGAGGGTATAATCAGTATCAGCACCATCACCAGCAGCACCACCAGCACCATTCACACCACCATCACCAGGGTCACTATCACAGGAAGGATAAGAACAAGTATTCTGGTGGGCCTGCACATGGGGGCGGCGGCGGTGGCCACTTGATGGCGCCATCTGCGGCGGGGGCGGCCCCTCCTGCTGTTGGAGGTTACAATCCTGGTGTGCCTCCGGCTGCACAGGGTCTCAACCCGGCATTGGGGCAAGCACTGACTGCTTTGCTTACTAATCAGGGTGCTGGATTAGGGCTTGGGAATTTGCTTGGAGGGCTTGGTGGTGCACCTGTGAACCAGCCTGGACCACCTGCTGGAGCTTATGGGAATCAGCCTGCTATGGGATATGGGAACCAACCGGGGATGCAGCCTGGCTATCAGAATCCTCAGATGGGGCAGAGCAGTGGTGTAAGGCCCCACCCTGGTGCTGGAGCTCCTTACATGGGTCATTAG 1527 0.5462 MAKKRKLRSSESETPKPIEQEQSQPQQTEQVTLDQQQNMALDEPVPPLNDVVEEEQQQQGEEQQNDEGEGEEQQEEEEEETLENQEDQLQEQPSGSQPVSAESNGAEAAAAAASEVEEDLDLEEEPVEKLLEPFTREQLLTLVKQAVEKHPDFADNVRQLAEVDPAHRKIFVHGLGWDATAETLTSVFGKYGEIEDCKAVTDKVSGKSKGYAFILFKNRIGARRALKQPQKRIGNRTTSCQLASAGPVPAPPPNVPPVVSEYTQRKIFVSNVSADIDPQKLLEFFKQFGEVEDGPLGLDKVTGKPKGFALFVYKTVESAKKALEEPHKNYEGHTLYCQKAVDGPKGSKGGYNQYQHHHQQHHQHHSHHHHQGHYHRKDKNKYSGGPAHGGGGGGHLMAPSAAGAAPPAVGGYNPGVPPAAQGLNPALGQALTALLTNQGAGLGLGNLLGGLGGAPVNQPGPPAGAYGNQPAMGYGNQPGMQPGYQNPQMGQSSGVRPHPGAGAPYMGH* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0420 508 MobiDBLite consensus disorder prediction 479 493 - -
Aev07g0420 508 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 1 495 - -
Aev07g0420 508 PANTHER NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATED 1 495 - -
Aev07g0420 508 MobiDBLite consensus disorder prediction 355 377 - -
Aev07g0420 508 SMART rrm1_1 169 241 IPR000504 GO:0003723
Aev07g0420 508 SMART rrm1_1 266 338 IPR000504 GO:0003723
Aev07g0420 508 SUPERFAMILY RNA-binding domain, RBD 155 249 IPR035979 GO:0003676
Aev07g0420 508 MobiDBLite consensus disorder prediction 1 15 - -
Aev07g0420 508 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 170 237 IPR000504 GO:0003723
Aev07g0420 508 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 267 335 IPR000504 GO:0003723
Aev07g0420 508 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 265 343 IPR000504 GO:0003723
Aev07g0420 508 MobiDBLite consensus disorder prediction 87 103 - -
Aev07g0420 508 MobiDBLite consensus disorder prediction 459 508 - -
Aev07g0420 508 MobiDBLite consensus disorder prediction 55 86 - -
Aev07g0420 508 Gene3D - 142 254 IPR012677 -
Aev07g0420 508 Gene3D - 258 395 IPR012677 -
Aev07g0420 508 MobiDBLite consensus disorder prediction 346 399 - -
Aev07g0420 508 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 168 245 IPR000504 GO:0003723
Aev07g0420 508 CDD RRM_RBM24_RBM38_like 168 243 - -
Aev07g0420 508 MobiDBLite consensus disorder prediction 16 39 - -
Aev07g0420 508 MobiDBLite consensus disorder prediction 1 123 - -
Aev07g0420 508 SUPERFAMILY RNA-binding domain, RBD 250 361 IPR035979 GO:0003676
Aev07g0420 508 CDD RRM_RBM24_RBM38_like 265 340 - -
Aev07g0420 508 Coils Coil 65 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0420 Aev-Chr7 2487166 2488692 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0420 261 344 C2H2 Transcription Factor Family AT2G19380 32.143 2.23e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0420 K12741 - gmx:100792637 559.296