Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0406 ATGAATAAGGATTCAAGTTCGCAGAGCCGAAAAGGCAATAAACAACAAAAGGATAACGATTGCGCACCGATCATGCATTCATGCGAGTATTGTGGCAAGACATTCGCCTCCGGAAAAGCCCTAGGAGGCCACAAGAGGCTCCACATTCAAGCTGAGAAGAAGAGAGAAAGGGAATTATTAGGTAACAATAACAATCAGAAGCTGAATTGTTATATTTGCAAGAAGGATTTCCCATCGGAAAAATCTCTTTTTGGACACATGAGGTCACACCCTCATAGAGATTGGAAGGGCATTCAACCACCAAACACATCCATGATTATTGATGATAATAATAATGGTTCTTCTTCCTCTGCCTCTAATTCCTCTTCTCATGATAGTAATAATAATAATAATGATTGTGATATTGATTTGTCAAAGTGTTTGCCACTACCATCATGGGGAAAGACAGATACAAGAGGGAGGGAAAGTGTTCTATGTTCAGCAATTCGAGCACTTGCTTCTATGATTGATGAATTAAGTGATTATGATGATAAATTAGAGGCCATAATGAAGAAAGAAGAAGAAAAGACACCAAGTAAGAAAAGAAAGTTGATTGTGAGATTTGACAATAATAATGAAGAGAATTTGGAGACAATACTAGATGGATACAAGTGTAACATTTGTGACGAGTCTTTTCCAACATTTCAAGGATTAAGAAGACATAGGTCATCAAGCCACAACAACAAGGATAAGAAATGCAAGATTAGTTGTTCTACCAATGATAAGAAAGGATCGGATGAAGAAGAAGCTAATAATAACTCTAAAGATTTTCCAAAGTTTGATTTGAATAAGCTTCCAAATGATGATAAGGATGAGAATTAA 861 0.3624 MNKDSSSQSRKGNKQQKDNDCAPIMHSCEYCGKTFASGKALGGHKRLHIQAEKKRERELLGNNNNQKLNCYICKKDFPSEKSLFGHMRSHPHRDWKGIQPPNTSMIIDDNNNGSSSSASNSSSHDSNNNNNDCDIDLSKCLPLPSWGKTDTRGRESVLCSAIRALASMIDELSDYDDKLEAIMKKEEEKTPSKKRKLIVRFDNNNEENLETILDGYKCNICDESFPTFQGLRRHRSSSHNNKDKKCKISCSTNDKKGSDEEEANNNSKDFPKFDLNKLPNDDKDEN* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0406 286 Pfam C2H2-type zinc finger 216 239 - -
Aev07g0406 286 Pfam C2H2-type zinc finger 26 48 - -
Aev07g0406 286 Pfam C2H2-type zinc finger 69 91 - -
Aev07g0406 286 MobiDBLite consensus disorder prediction 103 128 - -
Aev07g0406 286 SMART c2h2final6 216 239 IPR013087 -
Aev07g0406 286 SMART c2h2final6 68 90 IPR013087 -
Aev07g0406 286 SMART c2h2final6 26 48 IPR013087 -
Aev07g0406 286 ProSitePatterns Zinc finger C2H2 type domain signature. 218 239 IPR013087 -
Aev07g0406 286 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY 7 285 - -
Aev07g0406 286 ProSitePatterns Zinc finger C2H2 type domain signature. 28 48 IPR013087 -
Aev07g0406 286 SUPERFAMILY beta-beta-alpha zinc fingers 26 90 IPR036236 -
Aev07g0406 286 MobiDBLite consensus disorder prediction 232 286 - -
Aev07g0406 286 MobiDBLite consensus disorder prediction 90 128 - -
Aev07g0406 286 Gene3D Classic Zinc Finger 25 90 - -
Aev07g0406 286 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 7 285 IPR044653 GO:0003700
Aev07g0406 286 MobiDBLite consensus disorder prediction 1 21 - -
Aev07g0406 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 216 244 IPR013087 -
Aev07g0406 286 Coils Coil 165 185 - -
Aev07g0406 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 90 IPR013087 -
Aev07g0406 286 MobiDBLite consensus disorder prediction 242 286 - -
Aev07g0406 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 26 53 IPR013087 -
Aev07g0406 286 SUPERFAMILY beta-beta-alpha zinc fingers 215 241 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0406 26 104 C2H2 Transcription Factor Family AT2G26940 37.383 5.64e-17 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev07g0406 zf-C2H2_6 6.7e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0406 - - adu:107496635 167.933