Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0402 ATGTCGAGTGGAGCAACACACTGGTGTTATGAGTGCAGGCAACCAATAGTTGCACTCGGAGGGAGAGATGTCATCTGTCCCTACTGTGATGGAGGGTTTGTGCAAGAACTTAACGAGTTACGAGGATTTGCACCCCAAAATTCCTTTCCATCACATCAAGGAGAGTTTCATCAGATGCCTGATATATTTGATGCTATACATGCTTTTATGGGGCGGAGAGGTGCTGATCCAAGATTCGGGTTCATGGATGCTATGGATAATTTCATGAGGCAGAGAATGGGTGCAAGAAACCCAAATTTCGATGTCAGAGGAAGGTCTGGTCCTGCTCCCGTTCCTGAACAGAGTTGGGGTGTTTTTAGTTCTGGTCCTTACGTGATACTCCATGGTCAAGTTCCCTTGTCTAATGGCAGTCCAAGAGGTGGTCCCAGGCGTATTGATTTCGGTGACTACTTCATGGGCCCTGGATTGGAAGAACTTATTGAGCAGCTCACCGTGAATGAACGCCGCGGTCCACCCCCAGCGGCACGATCTTCAATTGATGCAATGCCTACCATCAAGATCACACAGGCGCATCTTCGCTTGGATTCACATTGCCCTGTTTGCAAAGAAAAATTCGAACTGGGCTCTGAAGCCAGAGAGATGCCATGTAACCATATTTACCACTGTGACTGTATTGTTCCTTGGTTGGTTCAGCATAACTCGTGTCCTGTCTGCCGTGTTGAACTTCCCCCTCAAGGACATGTTAGTTCTCGTGGCAGTCGAAGTGGGGGTGGAAGAAGTGCCGACACCAGTGGCAGCGGCAGCAATGATACCTCCAGGGCGAGGGAGAATGGCCATCAGAACCATGGAAGGAGAAATCTATTTTCGTTTTTGTGGCCGTTCCGTTCTTCTAGTTCGAACAACAATCATTATTCTGAGAACGGCGGAAGCAGCTCTTCAACCTCTTCTGATCAGAATAATGGAGCACGATTTAACGGATGGCACTTTGATTACTAA 996 0.4809 MSSGATHWCYECRQPIVALGGRDVICPYCDGGFVQELNELRGFAPQNSFPSHQGEFHQMPDIFDAIHAFMGRRGADPRFGFMDAMDNFMRQRMGARNPNFDVRGRSGPAPVPEQSWGVFSSGPYVILHGQVPLSNGSPRGGPRRIDFGDYFMGPGLEELIEQLTVNERRGPPPAARSSIDAMPTIKITQAHLRLDSHCPVCKEKFELGSEAREMPCNHIYHCDCIVPWLVQHNSCPVCRVELPPQGHVSSRGSRSGGGRSADTSGSGSNDTSRARENGHQNHGRRNLFSFLWPFRSSSSNNNHYSENGGSSSSTSSDQNNGARFNGWHFDY* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0402 331 Pfam Ring finger domain 197 239 IPR001841 -
Aev07g0402 331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 161 245 IPR013083 -
Aev07g0402 331 MobiDBLite consensus disorder prediction 246 281 - -
Aev07g0402 331 Pfam zinc-ribbon 6 37 IPR039525 GO:0061630
Aev07g0402 331 SUPERFAMILY RING/U-box 178 245 - -
Aev07g0402 331 MobiDBLite consensus disorder prediction 301 321 - -
Aev07g0402 331 SMART ring_2 198 238 IPR001841 -
Aev07g0402 331 MobiDBLite consensus disorder prediction 248 274 - -
Aev07g0402 331 CDD RING-H2_RNF126_like 198 239 - -
Aev07g0402 331 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 1 314 - -
Aev07g0402 331 ProSiteProfiles Zinc finger RING-type profile. 198 239 IPR001841 -
Aev07g0402 331 PANTHER OS03G0351800 PROTEIN 1 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0402 Aev-Chr7 2379478 2380473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0402 141 254 C3H Transcription Factor Family AT5G01980 43.103 2.81e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0402 K11982 - gmx:100813674 528.865