Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0366 ATGTGGCCATCCTCTGCCGCCGCAAGATCCCTCAACTACGGCCTCGCCCATCCCGACATGGCCGCCGCCAGCATGGTGGGACTCCGTGACGTGTTCGTGGTCGCCCCTGCTTCCTCCTTCCACCACCACACGCACCACCACAACCACAACCACCACCAAAACGACGCCGTCTTGTCCTCCTCCGAACTTCACAACATCAACAACAATTCCAACAATAACCCCGCAACTGCACTCGGAGTCGGCGTCGGCGTCGGCGTCATCCCTCTCCTCACCGCAACACCGTGTTTGGAAACCGAAAACATGTTAAGAAGCAGAAGCAGCAGCGGCGGAATTCAGTTCTGGCAGGATCAACAACCTCATCACCACTACATCAAGAAACAGGGTCTCATGGACCACAACGCCGCCGCAGCAATGAATTTGGTTCCGAGCAGCGGCGGGGGAGGAGGAGGCGGCGGAATGAGCAGTTCAAGCGGTGGGACTGCCACGTGTCAAGATTGTGGGAACCAGGCGAAGAAGGATTGCGCTCATAGGAGGTGCAGGACATGTTGCAAGAGTAGGGGTTTCGATTGCCCTACTCACGTGAAGAGCACGTGGGTACCCGCTGCTCGGCGGAGGGAGAGGCAGTTAATGGCGTCTGCTGGTGGGGCGGCGACGACTGCGGTGGCGGGTGGAGGGTCAAGTGGGTCCACCTCGGGGGCGAAGAAACCTAGGCTAATTGCATCTCAGACTACCACTAATTCTCATACTTCAACTTCTAACACCACTCCCCCTAGAAGCTTCGACACGAGTTCTAGCCACCAAGATGCGAGCTTGAAAGAGAAATTGCCAGGGCAAGTAAGAGCGCCGGCAGTGTTCAAGTGTGTGAGGGTGACGTCAGTGGATGATGGGGAAGACGAGTACGCGTATCAGGCAGTTGTGAGAATTGGTGGACACGTGTTCAAAGGGGTTCTCTATGATCAAGGCTTGGAGACTCACAGGGATGTCTATCCTAATCTCTCCGACCTCCATCTCGGCGGCGCCAGAAACAATGGTGTTTCATCATCATCACCAATGCTTGATCCTTCTGATGTGTATGCTGCTGCTGCTGCTGCTTCACTAGGAGGAGGAGCTTCAACCTATGCTTCTGCTAATTTCACCCCTTTCGGATCTCTCTCCCTCTCTCTTTCTCACACACTAATGTCTTCACTCCTCATCAACGATCTCCACGACCTTGCCCTCAAACCCAAGAGTGAAACATCAAGTGAATGTGAAGCCGAGATTCGTGGGGTGGAAGCTGGGAACCATGAGGGTGTGTGTGCGATTTGCTTGGACAAGATTGTGCTCCAGGAAACTGCTCTTGTAAAAGGTTGCGAGCATGCATACTGTGTGACTTGCATCCTTCGCTGGGCTACGTACAGCCAGAAAGTTACCTGCCCTCAGTGTAAGCATCCATTTGAGTTCCTCTTTGTCCATCGCTCGCTCGATGGCAGCATCCAAGATTACATGTTCGAGGAGAGCGTCTGCCTACTACTTAGGGCCTCATGGTTTCAACCTTTGAAGGTCGAAGATCATGTGGTCCATGAAGATGTCTATGACATCATTGAAGATTACTATCAATATGAGTATGAGGATGAGGATGAAGATCTAGATGAAGCTTACTATGGTAGCTCATCAAGCCTTCGCATAGGTAACCGTAGATGGGGAGACAATGGTTATGTTAGAGCAGGGCGTCTCGAAGCAAGGCCTGTTCATCATCGATCAAACTTCCAGGATTCCGGAGGAGCAAGCTCATCTCGTGAGCCAAGGAAGAAAGAGCCCGAAAAAGTTATGACAGGGCGACGAGCAAAGAGAGCGCTGAAGCGGGAAGCTGCGGATAAGGCAGCGGCAGCGAAGCATCAGCAGCATTTGATGAGGTTGGGCAGGAAGTGA 1908 0.5304 MWPSSAAARSLNYGLAHPDMAAASMVGLRDVFVVAPASSFHHHTHHHNHNHHQNDAVLSSSELHNINNNSNNNPATALGVGVGVGVIPLLTATPCLETENMLRSRSSSGGIQFWQDQQPHHHYIKKQGLMDHNAAAAMNLVPSSGGGGGGGGMSSSSGGTATCQDCGNQAKKDCAHRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMASAGGAATTAVAGGGSSGSTSGAKKPRLIASQTTTNSHTSTSNTTPPRSFDTSSSHQDASLKEKLPGQVRAPAVFKCVRVTSVDDGEDEYAYQAVVRIGGHVFKGVLYDQGLETHRDVYPNLSDLHLGGARNNGVSSSSPMLDPSDVYAAAAAASLGGGASTYASANFTPFGSLSLSLSHTLMSSLLINDLHDLALKPKSETSSECEAEIRGVEAGNHEGVCAICLDKIVLQETALVKGCEHAYCVTCILRWATYSQKVTCPQCKHPFEFLFVHRSLDGSIQDYMFEESVCLLLRASWFQPLKVEDHVVHEDVYDIIEDYYQYEYEDEDEDLDEAYYGSSSSLRIGNRRWGDNGYVRAGRLEARPVHHRSNFQDSGGASSSREPRKKEPEKVMTGRRAKRALKREAADKAAAAKHQQHLMRLGRK* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0366 635 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 275 322 IPR006511 -
Aev07g0366 635 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 162 204 IPR006510 -
Aev07g0366 635 Pfam Domain of unknown function (DUF702) 160 323 - -
Aev07g0366 635 MobiDBLite consensus disorder prediction 590 625 - -
Aev07g0366 635 ProSitePatterns Zinc finger RING-type signature. 450 459 IPR017907 -
Aev07g0366 635 Pfam Ring finger domain 432 475 IPR001841 -
Aev07g0366 635 MobiDBLite consensus disorder prediction 210 275 - -
Aev07g0366 635 ProSiteProfiles Zinc finger RING-type profile. 432 475 IPR001841 -
Aev07g0366 635 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 25 371 - -
Aev07g0366 635 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 410 497 IPR013083 -
Aev07g0366 635 SMART ring_2 432 474 IPR001841 -
Aev07g0366 635 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 25 371 IPR007818 GO:0003700|GO:0006355
Aev07g0366 635 MobiDBLite consensus disorder prediction 576 635 - -
Aev07g0366 635 SUPERFAMILY RING/U-box 431 482 - -
Aev07g0366 635 MobiDBLite consensus disorder prediction 222 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0366 Aev-Chr7 2151090 2162390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0366 2 357 C2H2 Transcription Factor Family AT5G12330 50.943 1.55e-89 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Aev07g0366 DUF702 2.3e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0366 - - jre:108994634 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0366 07 2151090 2162390 Aev07g0366 07 2151090 2162390 ECH