Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0355 ATGGCTTTCTTTAGGAACTTTATAGGTGATAGTGTCTCACACAGTGTCATTGAAGATAAAGACCAAGGACAAAATGCTGATAGAGTACGTAGATCAGTAGGTAATGAGTCTGCTGATGCAACTTCTAGTGAGAAGGAATTTGATATGAACATTGAGGCACAGTACCAGAGTGAAGGTGAACCAGATGGTACTAATAGACTGCAAAATGAAGAAACAGCTGAAGATGGAGCTGCTACAAGAGAATCAAACTTACATGCTACTGGTAGTAAAACAGCTATGGTCGGACGGTGGGGATCGACATTTTGGAAGGACTGCCGGCCTATGCGCCCTCAGAATGGTTCTGACTCCGGGCCAGAATCAAAAAGTGGATCAGACTATAGAAATGCGGATGGGTCTGAAGATAATTCGATGGATGGAAGAGAGGAAAGATTAGACTCAGAAGATGATGATGGACAAAAGGAAGCTGGAAAAGGTCCAAGAGGCCATTCTGATGTTCCCGCTGAGGAAATGTTGTCAGATGAATACTATGAGCAGGATGGGGAAGAGCAGAGTGATTCATTGCATTATAGAGGGACTCATAAAGCAACCGGATCAAATTCGTGGCCTCAACGAATGTCTAATATTGGGCATAACTCTGGCCGTAGGAAATCTAGGATTTCAGATGATGATGACGGTGATGATGATGATGAGGGCGATGCTGATTATGAAGAGGAGGATGAAGCTGATGAAGATGATCCTGATGATGCCGACTTTGAGCCTGCCACAAGTGCTCATGCTGCAAACAAGGATAAAGATTGGGAGGGTGAAGGCTCTGATGAAGATGATGATAGTGATGTAAATCTAGAGGTATCAGATGATGATGATGATGATGATTCTTATTATGCAAAAAAACCAAAGGGGAGGGTACGAGGTAAAGCTGGACGAAGCGTAAAACCTAATAGAGATCGCAAAACATATGCTACATCTGGTCGACAAAGAAGAGTTAAGTCTTCTTTCGAAGATGACGAGTCAACAGCAGATGATTCTGACAGTGATAGTGATGAGGATTTCAAAAACATAAAAAAGAGAGTCCACATACGCAAGAATAATGGTCGCACTTCTGCAGCTGCTAGTTTCTCTTTGCGCAACAGCGAGGTTCGCACGTCTAGTAGGACAGTTAGGAAGGTATCATATGTTGAAAGTGAAGAAAGTGAAGAAGCTGATGATGGGAAGAAGAAAAAGTCCCAAAAGGAAGAAATAGAAGAGGATGATGCTGACTCCATTGAAAAGGTGCTTTGGCATCAGCCGAAGGGCATGGCTGAAGATGCTCAAAGGAATAATAGATCAACAGAGCCTGTTTTGATGAGTCACTTGTTTGATTCTGAAATTGATTGGAATGAGATGGAATTCTTGATAAAATGGAAAGGCCAGTCACATTTGCACTGTCAGTGGAAGTCTTTTGCTGATCTGCAAAATCTCAGCGGTTTTAAGAAGGTTTTGAATTACACAAAAAAGATAATGGAGGACATCAGGTACAGGAGGTCAATTTCAAGAGAGGAGATTGAGGTCAATGATGTGAGTAAGGAGATGGATTTAGATATTATCAAGCAAAACAGTCAGGTGGAAAGAGTAATTGCAGATAGGATCAGCAAAGACAATTCTGGCAATGTTATTCCTGAATACTTGGTCAAGTGGCAAGGGTTATCTTATGCTGAAGCAACTTGGGAAAAGGACATTGATATTGCTTTTGCTCAACATGCTATTGATGAATATAAGGCTCGTGAGGCTGCAATGTCGGTTCAAGGAAAGACAGTAGATTCCCAGCGAAAGAAGAGCAAAGCAAGTTTGCGGAAGCTTGAGGAGCAACCTGAATGGTTGAGGGGTGGAAAGCTAAGGGATTATCAACTTGAGGGTTTGAATTTTCTTGTTAACAGTTGGAGAAATGATACAAATGTCATTTTAGCTGATGAAATGGGTCTCGGCAAAACTGTTCAGTCAGTATCAATGCTTGGTTTTCTACAGAATGCCCAGCAAATCCATGGTCCTTTTCTTGTAGTTGTACCATTGTCTACTTTATCAAACTGGGCCAAAGAATTCAGGAAATGGCTTCCTGATATGAATATTATTGTATACGTTGGTACACGTGCAAGTCGAGAGGTTTGTCAACAATATGAATTTCATAATGATAAAAAGGCTGGAAGACCTATTAAATTCAATGCGCTGTTAACTACATATGAGGTAGTTTTGAAAGATAAGGCTGTTCTCTCGAAGATCAGATGGAATTATCTGATGGTAGATGAGGCTCATAGACTAAAGAATAGTGAGGCACAGCTGTACACAACGCTTTCAGAATTTAGCACGAAGAACAAGTTGCTTATCACTGGAACTCCTCTACAAAATAGTGTCGAAGAGCTATGGGCTTTGCTCCACTTCCTTGATCCTGACAAGTTCAACAGCAAGGATGATTTTGTTCAAAACTATAAGAATCTGAGCTCTTTCAATGAGAATGAGCTTGCAAATCTTCATATGGAATTGAGGCCTCACATACTACGGAGAGTTATCAAGGATGTGGAGAAATCATTACCCCCTAAAATTGAGCGGATCCTTAGGGTTGAAATGTCTCCTCTTCAGAAACAGTATTATAAGTGGATTTTGGAGCGCAACTTTCATGATTTGAACAAAGGAGTTCGTGGGAATCAGGTTTCTCTTCTAAACATTGTAGTGGAATTAAAGAAGTGCTGTAACCATCCCTTCCTGTTTGAAAGTGCTGACCATGGCTATGGAGGGGACTCAGGAAGTAGCGATAACAGCAAGCTAGAGAGAATTGTCTTTAGCAGTGGCAAGCTTGTCATACTCGACAAGCTACTCGTTAAATTGCATGAAACCAAACATCGTGTTCTTATTTTCTCTCAGATGGTTAGAATGTTGGATATACTGGCAGAGTATATGTCACTTCGCGGATTTCAATTTCAGAGGCTTGATGGCAGTACAAAAGCTGAGTTGCGTCAGCAGGCAATGGATCACTTCAATGCACCTGGTAGTGATGATTTTTGCTTTCTTCTTTCAACACGAGCAGGAGGTCTGGGCATCAACCTTGCCACGGCAGACACTGTCATAATATTTGATTCTGATTGGAATCCTCAAAATGATCTGCAGGCCATGAGTAGAGCTCATAGAATTGGGCAACAAGAAGTTGTTAACATATATAGGTTTGTGACAAGCAAAAGTGTTGAGGAAGATATTTTGGAACGTGCTAAGAAGAAGATGGTTCTCGACCACCTGGTGATACAAAAATTAAATGCAGAGGGTAGATTGGAGAAGAAAGAAGCCAAAAAAGGAGGAAGTTTTTTTGACAAAAATGAGCTGTCTGCTATATTACGATTTGGAGCGGAGGAGCTTTTCAAGGAAGAAAGAAATGATGAAGAAAGCAAGAAACGACTCTTAAGTATGGATATTGATGAGATTCTTGAAAGAGCAGAGAAGGTTGAAGAGAAGGAAGCTGATGAAGAACAAGGAAATGAGTTATTAAGTGCATTTAAGGTTGCTAATTTCTGTAATGATGAAGATGATGCAAGTTTTTGGAGTCGTTGGATTAAGCCTGATGCTGTAGGGCAAGCAGAGGAAGCTCTTGCTCCACGTTCTGCAAGAAATATTAAAAGTTATGCTGAGGATAATCACTCTGAAAGAAGTAATAAAAGAAAAAAGAAGGAATCTGAACCACCTGAACGAGCTCAGAAACGCCGGAAAGCAGAGTACTCAGCTCCTGCAGTACCAATGATTGATGGAGCATCTGCCCAAGTGAGAAGTTGGTCATATGGGAATTTATCCAAGAGAGATGCTCTACGTTTTTCTCGTTCAATTATGAAATATGGGAATGAGAGCCAAATCGACATGATTGTTGCTGAGGTTGGTGGTGCTATTGGAGCAGCACCAGTTGAAGCACAAATTGAACTCTTCAATGCTCTAATTGATGGCTGTACAGAAGCTGTGGAGCTTGGAAGTCTGGATCCAAAGGGGCCTTTGCTGGATTTTTTTGGCGTCCCAGTGAAGGCAAATGATCTACTTGCCCGTGTCCAACAACTTCAACTCCTAGCAAAGCGCATTAGTCGATATGAAGATCCCATTCAACAATTCCGTGTTTTAACATATCTCAAGCCTTCAAACTGGTCGAAAGGTTGCGGATGGAATCAGATCGATGATGCGAGATTGCTTCTTGGAATACATTATCATGGATTTGGTAACTGGGAAAAGATTAGATTAGATGAAAGGCTTGGCCTTATCAAGAAAATTGCACCTGTAGAACTTCAACACCATGAAACTTTCTTGCCTCGAGCTCCAAATTTGAGAGACCGTGCAAATGCCCTTTTGGAGCAAGAACTTGCTGTTCTAGGTGTAAAAAATACCAACAGCAAGGTTGGACGGAAGCCTTCCAAGAAAGAGAGGGAGAGTGTGATGAACACGTCAATGTCGCGTGGGCAGGAGAAGAAAAAAATGGGTTCTGCTAAAGTTAATGTACAAATGAGAAAGGATAGACTTCAGAGACCACAAAAGGTTGAACCTATAGTCAAAGAGGAGGGTGAAATGTCAGATGATGAAGAAGTATATGAGCAGTTCAAGGAGGTAAAATGGATGGAATGGTGTCAAGATATGATGGTTGAAGAAATGAAAACTTTGAAACGTCTTCACCGGTTGCAGACGACCAGTGCCAATCTTCCAAAGGAAAAGGTGCTTTCAAAAATACGCAACTATTTACAACTTCTTGGGCGAAGGATAGATCAAATTGTTATAGAACATGAAGAGGAGCCGTATAAGCAAGACAGGATGACTGTGCGACTGTGGAAATATGTCTCCACCTTTTCGCATCTTTCAGGGGAGAGGCTTCATCAAATATATTCCAAACTTAAACAGGAGCAAGAAGTGGAGGCAGGGGTTGGCCCCTCTCATGCCAATGGTTCATTTAGCAGAAATGGAAACCCATTCAGCCGCCAAATCGAGAGGCCTAGAGGATTCAAAAATATGACGACAGCCTACCAAATGCCAGAGCCAGTCAATAATACAGGGAAATCCGAGGCATGGAAACGAAGGCGAAGAGCCGAAAGTGATGATCTTTTCCAGGGTCAGCTGCCACCTCAGAGAACCATGACTAATGGTATCCGGATTTCTGATCCTAGTGAACTCGGGATCCTTGGGGCTGGACCATCCGACAAACGTTTCATCAGCGAGAAACCATATCGGACCCAGCCTGGTGGGTTTCCTCCAAGGCAAGGCTTTTCTTCAGGCATAAAGTAA 5268 0.4189 MAFFRNFIGDSVSHSVIEDKDQGQNADRVRRSVGNESADATSSEKEFDMNIEAQYQSEGEPDGTNRLQNEETAEDGAATRESNLHATGSKTAMVGRWGSTFWKDCRPMRPQNGSDSGPESKSGSDYRNADGSEDNSMDGREERLDSEDDDGQKEAGKGPRGHSDVPAEEMLSDEYYEQDGEEQSDSLHYRGTHKATGSNSWPQRMSNIGHNSGRRKSRISDDDDGDDDDEGDADYEEEDEADEDDPDDADFEPATSAHAANKDKDWEGEGSDEDDDSDVNLEVSDDDDDDDSYYAKKPKGRVRGKAGRSVKPNRDRKTYATSGRQRRVKSSFEDDESTADDSDSDSDEDFKNIKKRVHIRKNNGRTSAAASFSLRNSEVRTSSRTVRKVSYVESEESEEADDGKKKKSQKEEIEEDDADSIEKVLWHQPKGMAEDAQRNNRSTEPVLMSHLFDSEIDWNEMEFLIKWKGQSHLHCQWKSFADLQNLSGFKKVLNYTKKIMEDIRYRRSISREEIEVNDVSKEMDLDIIKQNSQVERVIADRISKDNSGNVIPEYLVKWQGLSYAEATWEKDIDIAFAQHAIDEYKAREAAMSVQGKTVDSQRKKSKASLRKLEEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFHNDKKAGRPIKFNALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFNSKDDFVQNYKNLSSFNENELANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGSSDNSKLERIVFSSGKLVILDKLLVKLHETKHRVLIFSQMVRMLDILAEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGGSFFDKNELSAILRFGAEELFKEERNDEESKKRLLSMDIDEILERAEKVEEKEADEEQGNELLSAFKVANFCNDEDDASFWSRWIKPDAVGQAEEALAPRSARNIKSYAEDNHSERSNKRKKKESEPPERAQKRRKAEYSAPAVPMIDGASAQVRSWSYGNLSKRDALRFSRSIMKYGNESQIDMIVAEVGGAIGAAPVEAQIELFNALIDGCTEAVELGSLDPKGPLLDFFGVPVKANDLLARVQQLQLLAKRISRYEDPIQQFRVLTYLKPSNWSKGCGWNQIDDARLLLGIHYHGFGNWEKIRLDERLGLIKKIAPVELQHHETFLPRAPNLRDRANALLEQELAVLGVKNTNSKVGRKPSKKERESVMNTSMSRGQEKKKMGSAKVNVQMRKDRLQRPQKVEPIVKEEGEMSDDEEVYEQFKEVKWMEWCQDMMVEEMKTLKRLHRLQTTSANLPKEKVLSKIRNYLQLLGRRIDQIVIEHEEEPYKQDRMTVRLWKYVSTFSHLSGERLHQIYSKLKQEQEVEAGVGPSHANGSFSRNGNPFSRQIERPRGFKNMTTAYQMPEPVNNTGKSEAWKRRRRAESDDLFQGQLPPQRTMTNGIRISDPSELGILGAGPSDKRFISEKPYRTQPGGFPPRQGFSSGIK* 1756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0355 1755 CDD CD1_tandem 417 497 - -
Aev07g0355 1755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 845 IPR027417 -
Aev07g0355 1755 SMART chromo_7 530 589 IPR000953 -
Aev07g0355 1755 Coils Coil 1138 1165 - -
Aev07g0355 1755 MobiDBLite consensus disorder prediction 1 421 - -
Aev07g0355 1755 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1 112 1656 - -
Aev07g0355 1755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 848 1130 IPR027417 -
Aev07g0355 1755 Gene3D - 405 532 - -
Aev07g0355 1755 SMART ultradead3 620 819 IPR014001 -
Aev07g0355 1755 MobiDBLite consensus disorder prediction 64 78 - -
Aev07g0355 1755 MobiDBLite consensus disorder prediction 190 213 - -
Aev07g0355 1755 Gene3D - 615 854 IPR038718 -
Aev07g0355 1755 SUPERFAMILY Chromo domain-like 415 499 IPR016197 -
Aev07g0355 1755 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 112 1656 - -
Aev07g0355 1755 ProSiteProfiles Chromo and chromo shadow domain profile. 419 507 IPR000953 -
Aev07g0355 1755 MobiDBLite consensus disorder prediction 268 289 - -
Aev07g0355 1755 MobiDBLite consensus disorder prediction 1488 1506 - -
Aev07g0355 1755 SUPERFAMILY Chromo domain-like 511 587 IPR016197 -
Aev07g0355 1755 CDD SF2_C_SNF 930 1065 - -
Aev07g0355 1755 Pfam Helicase conserved C-terminal domain 941 1054 IPR001650 -
Aev07g0355 1755 SMART helicmild6 970 1054 IPR001650 -
Aev07g0355 1755 MobiDBLite consensus disorder prediction 223 250 - -
Aev07g0355 1755 MobiDBLite consensus disorder prediction 1201 1246 - -
Aev07g0355 1755 Gene3D - 534 586 - -
Aev07g0355 1755 MobiDBLite consensus disorder prediction 1462 1506 - -
Aev07g0355 1755 Gene3D - 855 1085 IPR027417 -
Aev07g0355 1755 MobiDBLite consensus disorder prediction 308 335 - -
Aev07g0355 1755 Pfam Domain of unknown function (DUF4208) 1534 1626 IPR025260 -
Aev07g0355 1755 MobiDBLite consensus disorder prediction 1699 1713 - -
Aev07g0355 1755 Gene3D - 1351 1463 - -
Aev07g0355 1755 ProSiteProfiles Chromo and chromo shadow domain profile. 532 596 IPR000953 -
Aev07g0355 1755 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 944 1095 IPR001650 -
Aev07g0355 1755 MobiDBLite consensus disorder prediction 126 169 - -
Aev07g0355 1755 Pfam SNF2-related domain 643 912 IPR000330 GO:0005524|GO:0140658
Aev07g0355 1755 SMART DUF4208_2 1522 1627 IPR025260 -
Aev07g0355 1755 MobiDBLite consensus disorder prediction 1632 1755 - -
Aev07g0355 1755 MobiDBLite consensus disorder prediction 364 388 - -
Aev07g0355 1755 MobiDBLite consensus disorder prediction 1212 1243 - -
Aev07g0355 1755 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 636 808 IPR014001 -
Aev07g0355 1755 Pfam Chromo (CHRromatin Organisation MOdifier) domain 533 587 IPR023780 -
Aev07g0355 1755 MobiDBLite consensus disorder prediction 389 421 - -
Aev07g0355 1755 CDD CD2_tandem 530 586 - -
Aev07g0355 1755 MobiDBLite consensus disorder prediction 1681 1695 - -
Aev07g0355 1755 Coils Coil 1084 1104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0355 Aev-Chr7 2049133 2062020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0355 646 1081 RAD5 or RAD16-like Gene Family AT1G02670 25.743 1.34e-34 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aev07g0355 SNF2_N 2.6e-65 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0355 K11367 - gmx:100808039 2913.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0355 07 2049133 2062020 Aev07g0355 07 2049133 2062020 ECH