Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0344 ATGAACAACAACAACAGTATTATTCCTGGTTGGAATTTTGAGAGTGATTCATGTATCATCAATCAAAAGAACCCCATGTGGCCGGACGAAGAACTAGGAGAACTATTATGGGAAAATGGTCAAGTAGTTTTCCAGAGCCAAACACAAAGGAAACAACAAGTTGAGAATAACTATTCATATTTTGACTCAAGAAAGGTTCATCAGAAAAATGATTTGTCAACAAGTAACTTGAGTCAACAAGATGAGACTGTGTCATGGATCCAATACCCAATTGAGGATCCAACACTGGAACAACAAAATTCTAATCTCTTATCTCAATTTGCACCTTGTGATGATGAAGTTAATGAGTCTTTCAAGCCAATCAAGCAAATGGAAGAGGCAAAGTTTACAAAATTTGTTTCATCACAACCATCTAATATCCCTACTCCAAGATTTCATCAACTTGCTAATGATTCATCTCAGAAAATCATCAATGACTTTAGTGATGGATCAAAAAAGGCACTACCAAAATTTTCTCACTTTTCAGCAAAGTTTAGTAGTGAGAAAGTAGTTAATAATGGCAATAACAATAAAATGTCACAAAATGAGGCAAAAGAATGCTCAGTTATGACAATTGGTTCAAGTCACTGTGGAAGCAACCATATTCCTCAGGAACAAGATGTTAGTAAAGTTTCAAGCAGTGGTGTTAGGAGAACTATTCCTTGGAGTGGTAAAGGAAAATCTTCTTCAGATATGATTGAGCCAACTTTGACTTCTTCTTCTGGTGGCTCTGGAAGTAGTAGTCTTGGCAAAACTTGTTCTTTATCAACAGGGAATCATGGCTTAAAGAGAAAAGTTAGTGATGCTGATGAATTAGAAGAACAAAGTGAGGCCACAGAACCTAATTCAACTGTTGGTAACAAGGCATCTCAGAGATCAGGTTCTTCAAAAAGGAACCGTTCAGCAGAAGTGCATAATTTATCAGAAAGGAGAAGAAGAGATAGGATCAATGAGAAGATGAGGGCATTGCAGGAACTGATACCAAACAGTAACAAGACAGACAAAGCATCAGTGTTAGAAGAGGCAGTTGAATACATGAAGTCACTTCAGTTACAGCTTCAGATAATGTGGATGGGGGCTGGAATGGGACCAGTAATGTTCCCAGCAGCAGGGATTCAAAATTACATGTCACAAATGTGTATGGGAATTGCAGCAGCAGCAGCAGCACCTTCTCTGCAATTACCAAGAATGCCACCAACAACAACAACACTTGATCAATCCATTTCTGTGGCTCAAGCACAAAACAAGGCTTTAATGTGCCAAAATCCACTTCTTGCCCCATTTAATTACCAAAATCAGATGCAGCAGAATCCATGCATTTCAGACCAATATGCTCGCTACATTATGGCTTATCATAATCTCATGCAAACTACATCTCAACAGCCAATTAATGTGTATGGTTATGGTTCCCATGTTACACAACCTAGTCAAACAATGAATGGAGCAGCTAATTTTGATGATGCCATCAGTGGCAAAATGGGTTCTTCCTCCTTTTAA 1536 0.3822 MNNNNSIIPGWNFESDSCIINQKNPMWPDEELGELLWENGQVVFQSQTQRKQQVENNYSYFDSRKVHQKNDLSTSNLSQQDETVSWIQYPIEDPTLEQQNSNLLSQFAPCDDEVNESFKPIKQMEEAKFTKFVSSQPSNIPTPRFHQLANDSSQKIINDFSDGSKKALPKFSHFSAKFSSEKVVNNGNNNKMSQNEAKECSVMTIGSSHCGSNHIPQEQDVSKVSSSGVRRTIPWSGKGKSSSDMIEPTLTSSSGGSGSSSLGKTCSLSTGNHGLKRKVSDADELEEQSEATEPNSTVGNKASQRSGSSKRNRSAEVHNLSERRRRDRINEKMRALQELIPNSNKTDKASVLEEAVEYMKSLQLQLQIMWMGAGMGPVMFPAAGIQNYMSQMCMGIAAAAAAPSLQLPRMPPTTTTLDQSISVAQAQNKALMCQNPLLAPFNYQNQMQQNPCISDQYARYIMAYHNLMQTTSQQPINVYGYGSHVTQPSQTMNGAANFDDAISGKMGSSSF* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0344 511 MobiDBLite consensus disorder prediction 211 274 - -
Aev07g0344 511 SMART finulus 319 368 IPR011598 GO:0046983
Aev07g0344 511 MobiDBLite consensus disorder prediction 311 328 - -
Aev07g0344 511 MobiDBLite consensus disorder prediction 211 328 - -
Aev07g0344 511 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 313 362 IPR011598 GO:0046983
Aev07g0344 511 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 8 492 IPR031066 -
Aev07g0344 511 PANTHER TRANSCRIPTION FACTOR PIF5 8 492 - -
Aev07g0344 511 MobiDBLite consensus disorder prediction 291 310 - -
Aev07g0344 511 Gene3D - 308 369 IPR036638 GO:0046983
Aev07g0344 511 Pfam Helix-loop-helix DNA-binding domain 317 363 IPR011598 GO:0046983
Aev07g0344 511 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 310 373 IPR036638 GO:0046983
Aev07g0344 511 CDD bHLH_AtPIF_like 313 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0344 Aev-Chr7 1983706 1987583 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0344 10 490 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43010 35.020 4.69e-60 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev07g0344 HLH 1.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0344 K16189 - gmx:100800166 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0344 07 1983706 1987583 Aev07g0344 07 1983706 1987583 ECH