Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0336 ATGACTGATTTGGAACCCGGTGTAGTTGTGGCCATGGATAGTAGTGCAAACGAAGCATCATCATCTTTGAGCTTTGTTTCATCTCATTTATCAAATGGTTGTTCAAGCAATGAGAATAATGGGGCAAGTATTGAAATCTTGAGCTTGAAGAAGCTCAGTGGTAGCCTTGAGAAGCTGCTGATTGATGCTGAATATGATTACACTGATGCTGAGATTCTTGTTGAAGGGATCCCTGTAGGTGTTCATAGGTGTGTATTGGCCTCGCGAAGTCCCTTCTTTCATGAGCTTTTGAAGAAAGGAAAGAGCGATGATTCGGCCAAGGAAGGGAAGCCGAGGTATCTCATGTCAGAATTGGTGCCTTATGGTGTTGTTGGACATGAGGCTTTCCTTGTTTTCTTGCATTATTTGTACACTGGGAATGTTAAGGCATCGCCGCCGGAGGTAACAACTTGTGTCGATGAAACGTGTATCCACGACTCGTGTCGCCCTGCTATCAACTATGCTTTGGAACTCATGTATGCCTCTGCCACTTTCCAGATGAAAGAGCTTGTTCTGCTTTTTCAGCGCCGCCTTCTAAACTTCGTTGAGAAAGCCGTGGTGGAAGACGTGATTCCTATTCTCATGGCTGCCTTCCACTGCCAACTAAGTCAGCTTCTCTCTCAATGCACTCAGAGGATAGCAAGGTCTGATCTTGACACCACATCTTTGGCAAAAGAACTCCCAGATGAAGTTGTGGCGGAAATCAAGTCACTCCGGATCCAATCAATGCCAGAGTCCACAGCTGATGCAAAGGAAGTGGAACCTTTGAATGATAAGAGTGTAAGGAGAATCCATAAGGCATTAGACTCTGATGATATTGAGCTGCTAGAGCTTCTTTTGAAAGAGTCTAATGTCACTCTAGATGAAGCTTATGCACTGCACTACGCCTGCGCCTATAGTGATTCTAAGGTTGTTCAAGAGGTTCTTAAGAAAGGCTGGTCCAACATTAATATAAGAAATCCGCGAGGATATACGGTTCTTCACGTGGCTGCGAGGCGAAAGGATCCAACCATTTTGGTAGCACTGCTGAATAAAGGGGCATGTGTATCAGATACTACTCCTGATGGACAAACTGCTCTAGCGATTTGCCAGAGGTTGACGAGGCACAAGGATTATCATGAGAAAACAATGCAGGGAAAGGAATCTAACAAAGACAGGCTCTGTGTTGATGTCCTTGAAAGAGAAATGAGGAGGAGTTCCTTATCTGTGAATATGTCCGTTTCATCACAGTTAACTGGTGCCGATCTGCATATGAGACTGGATTACTTTGAGGATAGAGTTGCATTTGCTAGGCTGTTGTTTCCTGCTGAGGCTAGAGTAGCGATGGAGAATGCCGAGGCAGAGTCAACTTCACTGTATGAAAACTCATTAGCTTTGAAGAGATCAAGTGGAAAACCTAAAGAAGTAGACCTGAATGAAACTCCCTCGGTTCGAACCAGAAAAATGCAGTTGAGATTGCATGCCCTTATGAAAACAGTTGAGAATGGTAGGCGCTTCTTTCCCCATTGCTCTGACGTGCTCGATAAGTTTCTGGAAGACGACATGCCTGATGTCTTCTTCCTAGATAAAGGCACAGAAGAAGAGCAGCGAATCAAGAAAGCGCGATTCATGGAACTCAAAGAAGATGTGCAGAAGGCATTTCATAAGGACATGGCTGAAAATAACCACCACCAATCTGGCTTCTCATCATCGGTCTCTTCCTCATCATCGTCGTCTCGCAGGGAAGGCCTAAGCCATCACAGAGTGAAGAAAAAGTGA 1797 0.448 MTDLEPGVVVAMDSSANEASSSLSFVSSHLSNGCSSNENNGASIEILSLKKLSGSLEKLLIDAEYDYTDAEILVEGIPVGVHRCVLASRSPFFHELLKKGKSDDSAKEGKPRYLMSELVPYGVVGHEAFLVFLHYLYTGNVKASPPEVTTCVDETCIHDSCRPAINYALELMYASATFQMKELVLLFQRRLLNFVEKAVVEDVIPILMAAFHCQLSQLLSQCTQRIARSDLDTTSLAKELPDEVVAEIKSLRIQSMPESTADAKEVEPLNDKSVRRIHKALDSDDIELLELLLKESNVTLDEAYALHYACAYSDSKVVQEVLKKGWSNINIRNPRGYTVLHVAARRKDPTILVALLNKGACVSDTTPDGQTALAICQRLTRHKDYHEKTMQGKESNKDRLCVDVLEREMRRSSLSVNMSVSSQLTGADLHMRLDYFEDRVAFARLLFPAEARVAMENAEAESTSLYENSLALKRSSGKPKEVDLNETPSVRTRKMQLRLHALMKTVENGRRFFPHCSDVLDKFLEDDMPDVFFLDKGTEEEQRIKKARFMELKEDVQKAFHKDMAENNHHQSGFSSSVSSSSSSSRREGLSHHRVKKK* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0336 598 Pfam Ankyrin repeats (many copies) 328 375 IPR002110 GO:0005515
Aev07g0336 598 Gene3D Potassium Channel Kv1.1; Chain A 36 228 IPR011333 -
Aev07g0336 598 Pfam NPR1/NIM1 like defence protein C terminal 377 581 IPR021094 -
Aev07g0336 598 MobiDBLite consensus disorder prediction 569 586 - -
Aev07g0336 598 PANTHER REGULATORY PROTEIN NPR3 15 595 IPR044292 GO:0009862|GO:2000022|GO:2000031
Aev07g0336 598 SMART BTB_4 68 195 IPR000210 GO:0005515
Aev07g0336 598 Pfam Domain of unknown function (DUF3420) 230 278 IPR024228 -
Aev07g0336 598 Gene3D - 269 409 IPR036770 -
Aev07g0336 598 MobiDBLite consensus disorder prediction 560 598 - -
Aev07g0336 598 ProSiteProfiles BTB domain profile. 68 145 IPR000210 GO:0005515
Aev07g0336 598 ProSiteProfiles Ankyrin repeat region circular profile. 335 360 - -
Aev07g0336 598 SMART ANK_2a 335 364 IPR002110 GO:0005515
Aev07g0336 598 SMART ANK_2a 272 300 IPR002110 GO:0005515
Aev07g0336 598 SMART ANK_2a 301 331 IPR002110 GO:0005515
Aev07g0336 598 PANTHER REGULATORY PROTEIN, PUTATIVE-RELATED 15 595 - -
Aev07g0336 598 CDD BTB_POZ_NPR_plant 50 195 - -
Aev07g0336 598 ProSiteProfiles Ankyrin repeat profile. 335 367 IPR002110 GO:0005515
Aev07g0336 598 Pfam BTB/POZ domain 65 150 IPR000210 GO:0005515
Aev07g0336 598 SUPERFAMILY POZ domain 65 193 IPR011333 -
Aev07g0336 598 SUPERFAMILY Ankyrin repeat 274 377 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0336 Aev-Chr7 1912270 1915354 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aev07g0336 NPR1_like_C 2e-83 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0336 K14508 - gmx:100814739 836.639