Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0301 ATGGACAAACATTCTGGGGATTCTGTGCCAGCTCATGGTGCTACAGCTATAAAAGTGGGGCGTAGTGCATGGGGAATACCACGTGGGACTGATCCATTTTATGCTTCAAGTGATGCTAGCTTGTTTTCTAGCTCACTTCCTGTTCTTAACCATGAAAAGCTAAATTTTACCAGTTCAGAGCATTATGATCAATCTGCTGATGATTACTTGCCGAGATTAGACAATGTTCACCAAGAAGATGAGGGACAAGATGCACTTGAAGATTTAAAAATCAAAGCAGTTGGAAAGATGCTACCTGATGATGAAGATGAACTATTAGCTGGGATAATGGATGACTTTGACCTTAGTAGGCTGCCCAGCCAACTGGAGGATCTTGATGAGAATGATCTTTTCGGCAGTGTTGGAGGGTTTGAAATGGATTTTGAACCTCAAGAAAGCCTTAGTATTGGTATGTCAAAGATAGGCTTATCTGATGGAGTTCCTTCAAATGGTATTGGTCATTATGCACTCCCAAATGCCATGGGAACCGTGGCTGGGGAGCATCCTTATGGTGAGCATCCATCAAGGACCTTGTTTGTGCGTAATATCAACAGTAATGTGGAGGACTCTGAATTAAGATCACTATTTGAGCAATATGGGGATATCAGAACATTGTACACTGCATGCAAGCATAGAGGCTTTGTGATGATATCTTACTATGACATTCGAGCTGCTCGCACTGCCATGCGTGCTTTGCAGAACAAGCCCTTGAGAAGAAGAAAACTTGATATCCATTTTTCAATTCCTAAGGATAACCCCTCAGAAAAGGATATTAACCAAGGAACTCTTGTAGTGTTCAACTTGGATCCATCAGTATCAAATGATGACCTTCGCCAAATATTTGGGGCTTATGGAGAGGTCAAAGAGATCAGAGAAACGCCACATAAAAGACACCATAAATTTATTGAATTTTATGATGTTAGAGCAGCAGATGCTGCTCTGAAAGCATTAAATCGAAGTGATATTGCTGGGAAACGTATCAAGCTTGAACCCAGCCGCCCTGGTGGAGCACGTCGGAACTTGATGCAACAACTAAGTCAAGAGCTGGAGCTAGATGATGCTCGCACTTTCAGGCATCAAGTGGGTTCACCAATTGCAAGTTCTCCACCTGGTAACTGGGCACTATTTGGCAGTCCAGTTGAACATAATCCATTACATTCTTTTAGCAAGTCCCCGGGTTTGAATTTTTCCAGCCCAACAAGTACCAACCATATGCCTGGATTGGCTGCAATTCTTTCACCACAGGCATCAACCTCCACAAAGATTGCACCAATAGGCAAGGACCCTGGAAGGACTAATAATGCAAATCAGATATTTGCAAGCTCTGGATCAACACAAGCAGCAGCTTTTCAGTATTCTATGTCCTTTCCTGATCAAAAAGCAAATGCAAGTCCTAGGCCTATATCTACTCTTGGTGAGTCAAATTCAAGTTCATCAAGTATTGGAACACTGTCGGGTCCTCAATTTCTTTGGGGAAGTCCAACTCCTTACTCAGAGCATTCAAATGCATCTGCGTGGTCTTCATCTTCTGTGGGGCTCTCATTCCCTTCTAATGGACAAAGACAGGGATTCCCATATACTAGTCGGCATAATTCTTTTCTTGGTTCTCACCCCCATCACCATGTTGGTTCTGCTCCATCTGGCCTTCCTCTTGATAGGTATTTTAGCTACTTTCCTGAGTCACCTGAAACTTCAATCAAGAGCCCAGTTGCATTTGAGAGTTTGAGTATAGGTGATGGGAGTTTTTCGATGAACATGGGTTCTCGTGCATCTCTTGGAGTTGGTGCTGGACATTCAGGAAATACAACTGAAATTGATTCACCTAATTTCAGAATGATGTCACTGCCTAGGCATGGTTCCATGTTCCTTGGAAATGGTTCATATTCTGGACCAGGAGCAACTAACATTGAGGGATTAGGTGAGCGTGGTCGAAGTAGGCGACATGACTATGGTGGGAACCAAATTGATAGCAAAAAGCAGTTCCAACTTGATCTGGACAAAATTATGAGCGGGGAAGACACAAGGACTACTTTAATGATTAAAAACATTCCTAACAAGTATACTTCAAAGATGCTGCTTGCTGCTATTGATGAGAATCACGGGGGAGGTTATGACTTTCTTTACTTGCCAATTGATTTCAAGAACAAGTGTAATGTGGGTTATGCTTTCATCAATATGGTGTCTCCTTCACACATCATCCCCTTCTACAAGGCATTTAATGGGAAGAAGTGGGAGAAGTTTAATAGTGAAAAAGTTGCTTCCTTGGCTTATGCCCGGATCCAGGGAAAGGGTGCACTTGTAACACACTTCCAAAATTCGAGCCTAATGAATGAGGATAAACGGTGCCGACCAATTCTCTTTCATTCGGAGAGCCAAGAGATTGGTGATGAGGAACATTTCCTCTCAAGCAATCTGAACATATTCATTCGTCAACCAGATGGATCTTACTCCGGTGATTTGTTGGAGAGCCCGAAGGGCAATTTGGACGAAATCTAG 2535 0.4276 MDKHSGDSVPAHGATAIKVGRSAWGIPRGTDPFYASSDASLFSSSLPVLNHEKLNFTSSEHYDQSADDYLPRLDNVHQEDEGQDALEDLKIKAVGKMLPDDEDELLAGIMDDFDLSRLPSQLEDLDENDLFGSVGGFEMDFEPQESLSIGMSKIGLSDGVPSNGIGHYALPNAMGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELELDDARTFRHQVGSPIASSPPGNWALFGSPVEHNPLHSFSKSPGLNFSSPTSTNHMPGLAAILSPQASTSTKIAPIGKDPGRTNNANQIFASSGSTQAAAFQYSMSFPDQKANASPRPISTLGESNSSSSSIGTLSGPQFLWGSPTPYSEHSNASAWSSSSVGLSFPSNGQRQGFPYTSRHNSFLGSHPHHHVGSAPSGLPLDRYFSYFPESPETSIKSPVAFESLSIGDGSFSMNMGSRASLGVGAGHSGNTTEIDSPNFRMMSLPRHGSMFLGNGSYSGPGATNIEGLGERGRSRRHDYGGNQIDSKKQFQLDLDKIMSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHGGGYDFLYLPIDFKNKCNVGYAFINMVSPSHIIPFYKAFNGKKWEKFNSEKVASLAYARIQGKGALVTHFQNSSLMNEDKRCRPILFHSESQEIGDEEHFLSSNLNIFIRQPDGSYSGDLLESPKGNLDEI* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0301 844 Pfam RNA recognition motif 2 688 784 IPR007201 -
Aev07g0301 844 CDD RRM2_MEI2_like 273 343 - -
Aev07g0301 844 MobiDBLite consensus disorder prediction 471 493 - -
Aev07g0301 844 SUPERFAMILY RNA-binding domain, RBD 690 774 IPR035979 GO:0003676
Aev07g0301 844 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 274 347 IPR000504 GO:0003723
Aev07g0301 844 SMART rrm1_1 275 343 IPR000504 GO:0003723
Aev07g0301 844 SMART rrm1_1 190 258 IPR000504 GO:0003723
Aev07g0301 844 SMART rrm1_1 690 766 IPR000504 GO:0003723
Aev07g0301 844 PANTHER RNA RECOGNITION MOTIF-CONTAINING 14 839 - -
Aev07g0301 844 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 191 255 IPR000504 GO:0003723
Aev07g0301 844 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 276 341 IPR000504 GO:0003723
Aev07g0301 844 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 189 262 IPR000504 GO:0003723
Aev07g0301 844 SUPERFAMILY RNA-binding domain, RBD 186 349 IPR035979 GO:0003676
Aev07g0301 844 Gene3D - 273 371 IPR012677 -
Aev07g0301 844 CDD RRM1_MEI2_like 188 264 IPR034453 -
Aev07g0301 844 PANTHER PROTEIN MEI2-LIKE 2 14 839 - -
Aev07g0301 844 CDD RRM3_MEI2_like 691 776 IPR034454 -
Aev07g0301 844 Gene3D - 177 272 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0301 Aev-Chr7 1723290 1727555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0301 184 499 Eukaryotic Initiation Factors Gene Family AT3G16380 24.207 5.84e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0301 - - gmx:100812324 1380.16