Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0291 ATGGAGATTATTGATGAATATGATGATGATGGGCATGAGAATGAGGAAATGGTGTTAAGAGTAGAAGAGGGGTCGTCATCAGGACAGCAGAAGAAGGGCGGGGGGAGGGGGAAGATAGAGATAAAGAGGATAGAGAACACAACAAACAGGCAGGTCACATTCTGCAAGAGAAGGAACGGTCTCCTCAAGAAGGCCTATGAGCTCTCTGTTCTCTGCGATGCAGAAGTTGCTCTTGTTGTCTTCTCCACGCGTGGCCGCCTCTATGAGTATGCCAACAACAGTGTTAGAGGAACTATCGAAAGGTATAAAAAAGCATGTGCACCTTCCACAAATGCTGAATCTATATCTGAAGCTAATACTCAGTTTTATCAACAAGAAACGTCTAAACTGAAAAGACAGATTCGAGACATTCAGAATCTAAACAAGCACATCCTTGGTGAAGCTCTTAGCTCTCTCAGTCTTAAGGAACTAAAGAACCTTGAGAGTAGATTGGAGAAAGGTCTAAGCAGAGTTAGATCTAGAAAGCATGAATCTTTGTTTGCTGATATCGAGTTCATGCAAAAGCGGGAGATTGAGCTGCAAAATCATAACAACTATCTGAGAACTAAGATAGCTGAACATGAGAGAGCAGAGCAGCAGCAGCAGCAGCAACAACCGAATTTGATGGAAGGAAATAATAATAATAATAATATGTGTGAGGGCATAGCTTCACAAGCACAATCATATGACAGGAATTTCTTCCCCGTCAATCTCTTGGATTCCAATACCCAATACTCATCACGCCAAGACCACACTGCTCTCCAACTAGTGTGA 813 0.4256 MEIIDEYDDDGHENEEMVLRVEEGSSSGQQKKGGGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSTRGRLYEYANNSVRGTIERYKKACAPSTNAESISEANTQFYQQETSKLKRQIRDIQNLNKHILGEALSSLSLKELKNLESRLEKGLSRVRSRKHESLFADIEFMQKREIELQNHNNYLRTKIAEHERAEQQQQQQQPNLMEGNNNNNNMCEGIASQAQSYDRNFFPVNLLDSNTQYSSRQDHTALQLV* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0291 270 ProSitePatterns MADS-box domain signature. 36 90 IPR002100 GO:0003677|GO:0046983
Aev07g0291 270 ProSiteProfiles K-box domain profile. 120 210 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev07g0291 270 CDD MADS_MEF2_like 39 109 IPR033896 GO:0000977|GO:0045944
Aev07g0291 270 Pfam K-box region 118 204 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev07g0291 270 Coils Coil 154 174 - -
Aev07g0291 270 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 43 90 IPR002100 GO:0003677|GO:0046983
Aev07g0291 270 ProSiteProfiles MADS-box domain profile. 34 94 IPR002100 GO:0003677|GO:0046983
Aev07g0291 270 PANTHER SERUM RESPONSE FACTOR HOMOLOG 27 261 - -
Aev07g0291 270 SUPERFAMILY SRF-like 35 111 IPR036879 GO:0003677|GO:0046983
Aev07g0291 270 Coils Coil 123 143 - -
Aev07g0291 270 SMART madsneu2 34 93 IPR002100 GO:0003677|GO:0046983
Aev07g0291 270 MobiDBLite consensus disorder prediction 211 227 - -
Aev07g0291 270 PRINTS MADS domain signature 56 71 IPR002100 GO:0003677|GO:0046983
Aev07g0291 270 PRINTS MADS domain signature 36 56 IPR002100 GO:0003677|GO:0046983
Aev07g0291 270 PRINTS MADS domain signature 71 92 IPR002100 GO:0003677|GO:0046983
Aev07g0291 270 Coils Coil 193 213 - -
Aev07g0291 270 Gene3D - 46 131 IPR036879 GO:0003677|GO:0046983
Aev07g0291 270 PANTHER MADS-BOX TRANSCRIPTION FACTOR ARLEQUIN 27 261 - -
Aev07g0291 270 MobiDBLite consensus disorder prediction 207 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0291 Aev-Chr7 1664946 1668826 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0291 21 270 MADS-box Gene Family AT3G58780 67.323 1.09e-114 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Aev07g0291 K-box 1.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0291 K09264 - gmx:100782733 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1808 01 23093927 23103861 Aev07g0291 07 1664946 1668826 PCT