Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0290 ATGGAGATTGATGATGATGATCATTATTATGATGGTGATGAGAATGAGAATGAGGAAGTGTTGTTAGGAGTAGGAGGAGAAGAAGGAGAAGGGTCGTCATCAGGACAGCAGAAGAAGGGCGGGGGAGGGGGCAGAGGGAAGATAGAGAACACAACAAACAGGCAGGTCACATTCTGCAAGAGAAGGAACGGTCTCCTCAAGAAGGCCTATGAGCTCTCTGTCCTCTGCGATGCAGAAGTTGCTCTTGTTGTCTTCTCCACAAGTGGCCGCCTCTATGAGTATGCCAACAACAGTGTCAGAGGAACTATCGAAAGGTATAAGAAAGCACGTACACCTTCCACAAATGCTGAATCTGTTGAAGCTAATGCACAGTTTTATCAACAAGAAATATCCAAATTGAAAAGACAGATTCGAGATATTCATAATCTAAACAGGCACATCCTTGGTGAAGCTCTAAGCTCTCTTAGTCTTAGGGAACTAAAGAGCCTTGAGAGTAGATTGGAAAAAGGTCTAAGCAGAGTTAGAACTAGAAAGCATGAATCTTTGTTTGCTGATATCGAGTTCATGCACAAGCGGGAGATTGAGCTGCAAAATCATAACAATTATATGAGAACTAAGATAGGTGAACATGAGAGAGCACAAGAGCAGCTGCAGCCGCAGCAACAGCAACCGCAACCGCAACAACAACCGAATTTGATGCAAGGAAATAATAATAATATGTATGATGAGGCCATAGCTTCACAATGGAATTTCTTCCCTGTGAATCTGTTAGATTCCAATGCCCAATAA 789 0.4284 MEIDDDDHYYDGDENENEEVLLGVGGEEGEGSSSGQQKKGGGGGRGKIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSTSGRLYEYANNSVRGTIERYKKARTPSTNAESVEANAQFYQQEISKLKRQIRDIHNLNRHILGEALSSLSLRELKSLESRLEKGLSRVRTRKHESLFADIEFMHKREIELQNHNNYMRTKIGEHERAQEQLQPQQQQPQPQQQPNLMQGNNNNMYDEAIASQWNFFPVNLLDSNAQ* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0290 262 MobiDBLite consensus disorder prediction 214 238 - -
Aev07g0290 262 Pfam K-box region 121 207 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev07g0290 262 Gene3D - 50 131 IPR036879 GO:0003677|GO:0046983
Aev07g0290 262 MobiDBLite consensus disorder prediction 211 238 - -
Aev07g0290 262 CDD MADS_MEF2_like 48 108 IPR033896 GO:0000977|GO:0045944
Aev07g0290 262 SMART madsneu2 43 97 IPR002100 GO:0003677|GO:0046983
Aev07g0290 262 MobiDBLite consensus disorder prediction 1 23 - -
Aev07g0290 262 PRINTS MADS domain signature 75 96 IPR002100 GO:0003677|GO:0046983
Aev07g0290 262 PRINTS MADS domain signature 40 60 IPR002100 GO:0003677|GO:0046983
Aev07g0290 262 PRINTS MADS domain signature 60 75 IPR002100 GO:0003677|GO:0046983
Aev07g0290 262 ProSiteProfiles MADS-box domain profile. 47 98 IPR002100 GO:0003677|GO:0046983
Aev07g0290 262 PANTHER SERUM RESPONSE FACTOR HOMOLOG 39 261 - -
Aev07g0290 262 ProSiteProfiles K-box domain profile. 123 213 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev07g0290 262 Coils Coil 116 143 - -
Aev07g0290 262 MobiDBLite consensus disorder prediction 1 49 - -
Aev07g0290 262 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 47 94 IPR002100 GO:0003677|GO:0046983
Aev07g0290 262 SUPERFAMILY SRF-like 47 125 IPR036879 GO:0003677|GO:0046983
Aev07g0290 262 PANTHER MADS-BOX TRANSCRIPTION FACTOR ARLEQUIN 39 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0290 Aev-Chr7 1649491 1653330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0290 26 262 MADS-box Gene Family AT3G58780 59.600 1.59e-91 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Aev07g0290 K-box 1.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0290 K09264 - gmx:100792224 278.1