Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0139 ATGGCGGACTCGGATAACGAGTCAGGAGGAGCACAGAACGCAGGGAACAATGCTAACAGCGAGCTTTCGCCGAGGGAGCAGGACCGGTTCCTACCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCTCTTCCGGCGAACGCGAAGATCTCGAAGGACGCGAAGGAGACGGTGCAGGAGTGCGTGTCGGAGTTCATCAGCTTCATCACCGGCGAAGCCTCCGACAAGTGCCAACGCGAGAAGCGGAAGACGATCAACGGCGACGATCTGCTCTGGGCGATGACCACGCTAGGGTTCGAAGAGTACGTGGAGCCTCTCAAAATCTACCTGCAGAGGTTCAGGGAGATGGAAGGTGAGAAGAGCGTGGCGGCGCGTGACAAAGACGCTGGCGTCGTCGGCGCGGGGTACGAGTACGGTGGTGCGGCAGCAATGGGGATGATGATGCATCAGGGACACGTGTACGGCTCTGGTGGATTCCATCAAGTGGCTGTGACTGGTGGTAGTGGAAGTGGTGGTGGTCCTGTTATGGGTAAGGGTGGGCCCAGTTATCCTGGTGCTGGATCTAATGCGGGTAGGCCCAGATAG 585 0.5846 MADSDNESGGAQNAGNNANSELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFREMEGEKSVAARDKDAGVVGAGYEYGGAAAMGMMMHQGHVYGSGGFHQVAVTGGSGSGGGPVMGKGGPSYPGAGSNAGRPR* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0139 194 MobiDBLite consensus disorder prediction 1 24 - -
Aev07g0139 194 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 150 IPR027113 GO:0001228|GO:0006355|GO:0016602
Aev07g0139 194 MobiDBLite consensus disorder prediction 168 194 - -
Aev07g0139 194 SUPERFAMILY Histone-fold 27 126 IPR009072 GO:0046982
Aev07g0139 194 MobiDBLite consensus disorder prediction 1 27 - -
Aev07g0139 194 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Aev07g0139 194 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Aev07g0139 194 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Aev07g0139 194 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Aev07g0139 194 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2 1 150 - -
Aev07g0139 194 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Aev07g0139 194 Gene3D Histone, subunit A 18 133 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0139 Aev-Chr7 801789 802373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0139 1 124 CCAAT-HAP3 Transcription Factor Family AT4G14540 83.871 7.40e-74 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aev07g0139 CBFD_NFYB_HMF 1.8e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0139 K08065 - gmx:100813580 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0139 07 801789 802373 Aev07g0139 07 801789 802373 ECH