Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0115 ATGAATTCTTCTAGGTGCTTCCCTCCTCCTCCACCAGAGTCCTTGTTCAGTTCAACCAGCATGGCTTCATTTTCTTCGAATTCTGCAGCAGGGGAAGATAGAGTGGCTAGTACTAGGAACAGGGCAAGACCTTCTTTCATGGTTCGGATGGCCATGAGGGTATCTAGAGCAAGATGGTTTACCTTCTTAAGAATAGTTTTTCATTACCAAAACGGATCGAGGTCCAACCTTGGCTCTAACCCTTTCAATACTAGCACATGGATGATGCTGGAGTTTATTGCTTTGATTGTACAAGTAACCATTATAACATTCACTTTGGCCGTTTCCAAGAGGGAGAGACCTGTTTGGCCTATGAGGATTTGGACAGCTGGTTATGATATTGGCTGTGTTCTTAATCTGCTGCTGCTTTTCGGGCGCTACCGGCAAATTCATCTGGCTCAAGGAGATGCTCTCAGCTTTTCTGATATGGAACAGCAGAGAAGCAATGAAGAAACCAGTGTATACAGGATCTCCCATTTGATGAACAAGTGCAGGACTTCACTTGAGCTTTTCTTTGCAATATGGTTTGTGATGGGAAATGTTTGGGTTTTTGACTCACGTTTTGGATCTTTTCACCAAGCTCCAAAGCTCCATGTTCTTTGCATCGCCCTCCTTGCATGGAATGCTATCTGCTACTCTTTCCCTTTCCTTCTGTTTCTTCTGTTATGCTGCTGTGTGCCGCTGATTAGCCGCCTCCTCGGCTACAACATGAACATGGGGTCCTCTGATAAAGGAGCATCTGATGATCAAATTTCACAGCTTCCAAGTTGGAGACATAAAGAAGTTCATGACTCTGAAAGCAGTGAGAAATTGATCAATGAGGATCCAGAATGCTGCATTTGCTTGGCCAAGTACAAAGAGAAAGAAGAAGTTAGACAATTGCCATGTTCTCATGTGTTCCATCTTAAATGTGTGGATCAATGGCTGAAAATTATATCTTGCTGCCCTCTTTGCAAACAAGGATTAGATAGATAG 1014 0.4339 MNSSRCFPPPPPESLFSSTSMASFSSNSAAGEDRVASTRNRARPSFMVRMAMRVSRARWFTFLRIVFHYQNGSRSNLGSNPFNTSTWMMLEFIALIVQVTIITFTLAVSKRERPVWPMRIWTAGYDIGCVLNLLLLFGRYRQIHLAQGDALSFSDMEQQRSNEETSVYRISHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHQAPKLHVLCIALLAWNAICYSFPFLLFLLLCCCVPLISRLLGYNMNMGSSDKGASDDQISQLPSWRHKEVHDSESSEKLINEDPECCICLAKYKEKEEVRQLPCSHVFHLKCVDQWLKIISCCPLCKQGLDR* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0115 337 CDD RING-H2_RNF111_like 289 332 - -
Aev07g0115 337 Pfam Ring finger domain 290 332 IPR001841 -
Aev07g0115 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 247 336 IPR013083 -
Aev07g0115 337 MobiDBLite consensus disorder prediction 1 20 - -
Aev07g0115 337 MobiDBLite consensus disorder prediction 1 15 - -
Aev07g0115 337 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 25 336 - -
Aev07g0115 337 SMART ring_2 291 331 IPR001841 -
Aev07g0115 337 SUPERFAMILY RING/U-box 279 335 - -
Aev07g0115 337 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 25 336 - -
Aev07g0115 337 ProSiteProfiles Zinc finger RING-type profile. 291 332 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0115 Aev-Chr7 695238 697119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0115 46 335 C3H Transcription Factor Family AT4G26580 74.227 1.51e-155 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0115 - - gmx:100813670 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0115 07 695238 697119 Aev07g0115 07 695238 697119 ECH