Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0039 ATGAAGTCGGGGGAAACCAGCGGTGGACAAGAGGCCACGTGTCACAGCGGATGCATTATTAGCAAGAGGATCCAACGGACCCAAACAACATCCCCCTTTTTCCCTCGCTTCCTCCCTCCCTCCCTCTGCAACCCCTCACCGGCGCTGCCAGATTTCGCGATGGCGGATTCCGATAACGAATCGGGAGGGAATCCTAACAACAGCGGCCATGGAGGCGGAGACCCGTCGTCGAAGGAGCAGGACCGGTTCCTGCCGATAGCGAACGTGAGCAGGATAATGAAGAAGGCGCTGCCGGCGAACGCGAAGATATCGAAGGACGCGAAGGAGACGGTGCAGGAGTGCGTGTCGGAGTTCATAAGCTTCATAACGGGGGAAGCATCGGACAAGTGCCAGCGCGAGAAGAGGAAGACGATCAACGGCGACGACTTGCTGTGGGCGATGACGACCCTTGGATTCGAGGAGTACGTGGAGCCCTTGAAGGTGTACCTGCACCGGTATCGGGAGGTGGAAGGCGACAAGGCCTCGTCTCTGGGGAGGCAGCAGGGCGACAAGGACTCTGCTTCTGCCTCTGCTTCTGCAATAAGTAGTAGTGGTGGTGGAGATCAGTTCGACGGTGGGGCTGGGATGATGATGATGGGCCATTATCAGGTCTATGGTGGTCATGCTGCTGCTTCAGGGTTTCATCACTCCGCCGGAGCCGGAGCCGGAGCCGGTGCTGGTGCTAATGGCAGGCCTAGGTAG 741 0.587 MKSGETSGGQEATCHSGCIISKRIQRTQTTSPFFPRFLPPSLCNPSPALPDFAMADSDNESGGNPNNSGHGGGDPSSKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLHRYREVEGDKASSLGRQQGDKDSASASASAISSSGGGDQFDGGAGMMMMGHYQVYGGHAAASGFHHSAGAGAGAGAGANGRPR* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0039 246 MobiDBLite consensus disorder prediction 172 200 - -
Aev07g0039 246 ProSitePatterns NF-YB/HAP3 subunit signature. 114 130 IPR003956 GO:0005634|GO:0006355|GO:0043565
Aev07g0039 246 MobiDBLite consensus disorder prediction 48 80 - -
Aev07g0039 246 SUPERFAMILY Histone-fold 80 185 IPR009072 GO:0046982
Aev07g0039 246 Gene3D Histone, subunit A 73 197 IPR009072 GO:0046982
Aev07g0039 246 PRINTS CCAAT-binding transcription factor subunit A signature 111 129 - -
Aev07g0039 246 PRINTS CCAAT-binding transcription factor subunit A signature 149 167 - -
Aev07g0039 246 PRINTS CCAAT-binding transcription factor subunit A signature 130 148 - -
Aev07g0039 246 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 54 225 IPR027113 GO:0001228|GO:0006355|GO:0016602
Aev07g0039 246 MobiDBLite consensus disorder prediction 59 74 - -
Aev07g0039 246 MobiDBLite consensus disorder prediction 180 199 - -
Aev07g0039 246 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2 54 225 - -
Aev07g0039 246 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 83 147 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0039 Aev-Chr7 274499 275239 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0039 54 214 CCAAT-HAP3 Transcription Factor Family AT4G14540 73.913 3.78e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aev07g0039 CBFD_NFYB_HMF 2.8e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0039 K08065 - vvi:100261380 212.231